Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 API5-210ENST00000534600 1760 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 EEF1A1P29-201ENST00000416082 1096 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL354868.1-201ENST00000417077 482 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 CFL1P1-202ENST00000432948 411 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RPL36AP39-201ENST00000445859 318 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 HIGD1AP8-201ENST00000453927 274 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RN7SL583P-201ENST00000475692 287 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RPL5P12-201ENST00000477071 851 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 OARD1-211ENST00000480585 829 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC022215.1-201ENST00000481770 362 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC021146.10-201ENST00000515628 706 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC083837.1-201ENST00000565297 2994 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RN7SL184P-201ENST00000488308 297 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RBM22P1-201ENST00000578589 1214 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL352984.2-202ENST00000613699 155 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL118522.2-201ENST00000616045 615 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 MRPS21P3-201ENST00000436696 262 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 CUBNP2-201ENST00000443534 1139 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC104164.1-201ENST00000460282 590 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RPS4XP20-201ENST00000505751 772 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RPA2P3-201ENST00000533268 770 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC021766.1-201ENST00000624404 741 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL133270.1-201ENST00000402635 279 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC245047.2-201ENST00000441060 530 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AL022319.1-201ENST00000458183 1167 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 SSX6-203ENST00000509958 336 ntTSL 3 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 OR4A40P-201ENST00000533878 948 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 GSTP1P1-201ENST00000548078 319 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC137768.1-201ENST00000549998 553 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 NANOGP3-201ENST00000605855 286 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC126915.2-201ENST00000610957 190 ntBASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SYNE1Q8NF91 AP001029.2-203ENST00000589795 4910 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms