Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC005252.1-201ENST00000604518 1063 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC068870.2-201ENST00000620635 389 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC074101.1-201ENST00000637861 241 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 RNA5SP507-201ENST00000363603 121 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 MIR105-2-201ENST00000385083 81 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 SPTLC1P2-201ENST00000407089 121 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AL354868.1-201ENST00000417077 482 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 RPS11P7-201ENST00000442125 465 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AC090114.3-201ENST00000479267 829 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AC006427.1-201ENST00000514359 712 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AC095055.1-201ENST00000603472 1113 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 AL162574.1-201ENST00000615702 950 ntBASIC8.31□□□□□ -1.08
VPS8Q8N3P4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS8Q8N3P4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AC006210.2-201ENST00000367074 1545 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 RPL23P2-201ENST00000320371 421 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 RN7SL197P-201ENST00000466981 299 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 RPL7P41-201ENST00000485823 957 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AP002373.2-201ENST00000541631 1060 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AL445222.1-201ENST00000607259 628 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AL021707.7-201ENST00000607991 416 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 MIR6839-201ENST00000620425 113 ntBASIC8.3□□□□□ -1.08
VPS8Q8N3P4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VPS8Q8N3P4 AC092681.1-201ENST00000297369 291 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 RN7SKP126-201ENST00000411143 300 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC017019.1-201ENST00000426129 261 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 RPS4XP16-201ENST00000427198 791 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 HSPD1P12-201ENST00000429127 1069 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AL359265.1-201ENST00000440296 795 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 RPS12P31-201ENST00000491419 398 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 RPS4XP20-201ENST00000505751 772 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AL627230.1-201ENST00000613077 211 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AL591926.8-201ENST00000616876 211 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AL139805.2-201ENST00000455305 2433 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AC079298.1-201ENST00000625026 1619 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS8Q8N3P4 MIR589-201ENST00000385238 99 ntBASIC8.29□□□□□ -1.08
VPS8Q8N3P4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms