Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC004890.3-201ENST00000605566 1095 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC135507.1-201ENST00000607214 561 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC092681.3-201ENST00000609463 678 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC096861.1-201ENST00000616652 240 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC025016.1-201ENST00000616746 682 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 CXADRP3-202ENST00000617265 1100 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL591926.1-201ENST00000620542 217 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AL357562.1-201ENST00000624911 609 ntBASIC5.95□□□□□ -1.46
VRK3Q8IV63 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK3Q8IV63 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VRK3Q8IV63 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 TTC41P-205ENST00000551270 3963 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC008627.1-201ENST00000517511 1704 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RNA5SP514-201ENST00000363717 111 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 Y_RNA.436-201ENST00000384097 102 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RNA5SP251-201ENST00000410614 137 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 TRIM60P17-201ENST00000415181 719 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RPS7P8-201ENST00000418311 581 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL606495.1-201ENST00000422100 813 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL358794.1-201ENST00000445689 381 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RPL23AP60-201ENST00000450011 454 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 RPL7L1P3-201ENST00000455249 689 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 SLC25A51P1-201ENST00000468432 871 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VRK3Q8IV63 DEFB109A-201ENST00000482450 265 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 RN7SL741P-201ENST00000482473 289 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL035690.1-201ENST00000490892 383 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 RPL37P23-201ENST00000492641 294 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 RNU6-276P-201ENST00000516114 96 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC091163.3-201ENST00000518269 1144 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC024405.1-201ENST00000532521 1042 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ZNF321P-202ENST00000550843 495 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 MIR132-201ENST00000591554 101 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AC018638.7-201ENST00000605836 1114 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL645933.2-201ENST00000606743 1207 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.94□□□□□ -1.46
VRK3Q8IV63 AL139407.1-201ENST00000613826 1175 ntBASIC5.94□□□□□ -1.46
VRK3Q8IV63 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms