Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC099670.2-201ENST00000435130 321 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 MTND2P40-201ENST00000436718 841 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC073072.2-201ENST00000447425 348 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 MEMO1P4-201ENST00000453590 386 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 RPS23P6-201ENST00000466136 431 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 RN7SL717P-201ENST00000478343 297 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 RPL32P33-201ENST00000487023 394 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC111000.6-201ENST00000514471 709 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC021678.3-201ENST00000517893 476 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC139365.2-201ENST00000517972 253 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC022404.1-201ENST00000555320 273 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 RNA5SP440-201ENST00000612665 119 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC090607.5-201ENST00000615692 224 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC138965.3-201ENST00000623875 498 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AL390318.1-201ENST00000624564 687 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AC027279.1-201ENST00000568885 4284 ntBASIC5.29□□□□□ -1.56
RTL4Q6ZR62 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTL4Q6ZR62 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 DDX18P6-201ENST00000450119 1997 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MAPK10-328ENST00000641553 4009 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 CHEK2P5-201ENST00000423877 246 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC002504.1-201ENST00000438281 691 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 OR7E116P-201ENST00000448529 957 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC004129.2-201ENST00000457229 287 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC009120.1-201ENST00000493458 473 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC105384.2-201ENST00000508433 640 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 SNORA43.3-201ENST00000517240 103 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC020978.7-201ENST00000575953 1187 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 RN7SL753P-201ENST00000581238 290 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 HIRAP1-201ENST00000605318 787 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MIR6862-1-201ENST00000613016 70 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MIR6862-2-201ENST00000614755 70 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 AC005618.4-201ENST00000625053 554 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RTL4Q6ZR62 MFSD8-239ENST00000641590 2479 ntBASIC5.28□□□□□ -1.56
RTL4Q6ZR62 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AC009962.1-201ENST00000567327 3813 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AL159987.1-201ENST00000347911 293 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 SNORA64.1-201ENST00000362600 132 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 RNA5SP242-201ENST00000364171 118 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 RMRPP5-201ENST00000411156 267 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 BMS1P17-202ENST00000416720 316 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AL662874.1-201ENST00000426065 230 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 HMGN2P27-201ENST00000427352 270 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.27□□□□□ -1.57
RTL4Q6ZR62 Z84478.1-201ENST00000438230 1219 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 AC005297.1-201ENST00000444765 862 ntBASIC5.27□□□□□ -1.57
RTL4Q6ZR62 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms