Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAE1P78406 AC234772.1-201ENST00000377927 937 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 NPM1P37-201ENST00000403105 874 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC096533.1-201ENST00000411645 353 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.62□□□□□ -1.51
RAE1P78406 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 NENFP1-201ENST00000419476 466 ntBASIC5.62□□□□□ -1.51
RAE1P78406 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 HMGB3P5-201ENST00000428894 612 ntBASIC5.62□□□□□ -1.51
RAE1P78406 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RAE1P78406 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.62□□□□□ -1.51
RAE1P78406 PNKDP1-201ENST00000435914 430 ntBASIC5.62□□□□□ -1.51
RAE1P78406 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RAE1P78406 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 BMS1P10-201ENST00000443754 1120 ntBASIC5.62□□□□□ -1.51
RAE1P78406 HMGB1P26-201ENST00000452520 628 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC069277.2-201ENST00000454211 432 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 AL139824.2-201ENST00000458731 1095 ntBASIC5.62□□□□□ -1.51
RAE1P78406 RPS17P11-201ENST00000474297 293 ntBASIC5.62□□□□□ -1.51
RAE1P78406 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.62□□□□□ -1.51
RAE1P78406 RFPL4AP3-201ENST00000515267 345 ntBASIC5.62□□□□□ -1.51
RAE1P78406 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 BUD31P1-201ENST00000521828 359 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
RAE1P78406 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 AC002519.2-203ENST00000567043 837 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC090826.1-203ENST00000569235 490 ntBASIC5.62□□□□□ -1.51
RAE1P78406 TXNP4-201ENST00000575018 310 ntBASIC5.62□□□□□ -1.51
RAE1P78406 MIR4509-3-201ENST00000578671 94 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.62□□□□□ -1.51
RAE1P78406 MIR4509-2-201ENST00000583920 94 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.62□□□□□ -1.51
RAE1P78406 AC009974.1-201ENST00000608881 455 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC093388.1-201ENST00000609166 430 ntBASIC5.62□□□□□ -1.51
RAE1P78406 MIR6809-201ENST00000612189 116 ntBASIC5.62□□□□□ -1.51
RAE1P78406 MIR4509-1-201ENST00000618224 94 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AL445670.1-201ENST00000618889 801 ntBASIC5.62□□□□□ -1.51
RAE1P78406 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 AL669942.2-201ENST00000620352 697 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AC096708.4-201ENST00000620563 552 ntBASIC5.62□□□□□ -1.51
RAE1P78406 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.62□□□□□ -1.51
RAE1P78406 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RAE1P78406 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 AC008432.1-201ENST00000615912 1320 ntBASIC5.62□□□□□ -1.51
RAE1P78406 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 AC010329.1-201ENST00000593903 8328 ntBASIC5.62□□□□□ -1.51
RAE1P78406 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RAE1P78406 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RAE1P78406 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 FUNDC2P3-201ENST00000334716 533 ntBASIC5.61□□□□□ -1.51
RAE1P78406 RNU6-252P-201ENST00000363232 107 ntBASIC5.61□□□□□ -1.51
RAE1P78406 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
RAE1P78406 OR13C3-201ENST00000374781 1108 ntBASIC5.61□□□□□ -1.51
RAE1P78406 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 AL354890.1-201ENST00000413730 346 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.61□□□□□ -1.51
RAE1P78406 HSPD1P9-201ENST00000420325 1636 ntBASIC5.61□□□□□ -1.51
RAE1P78406 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.61□□□□□ -1.51
RAE1P78406 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.61□□□□□ -1.51
RAE1P78406 AC092447.3-201ENST00000426027 686 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.61□□□□□ -1.51
RAE1P78406 AC092447.2-201ENST00000435487 669 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC096775.1-201ENST00000437724 448 ntBASIC5.61□□□□□ -1.51
RAE1P78406 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RAE1P78406 RPSAP40-201ENST00000442343 891 ntBASIC5.61□□□□□ -1.51
RAE1P78406 MTCYBP21-201ENST00000443300 1113 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AL157777.1-201ENST00000468100 304 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC020898.1-201ENST00000474167 787 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC093719.1-201ENST00000480427 441 ntBASIC5.61□□□□□ -1.51
RAE1P78406 SYT14P1-201ENST00000481459 721 ntBASIC5.61□□□□□ -1.51
RAE1P78406 AC008427.1-201ENST00000503102 655 ntBASIC5.61□□□□□ -1.51
RAE1P78406 PPBPP2-201ENST00000513150 1362 ntBASIC5.61□□□□□ -1.51
RAE1P78406 NPM1P21-201ENST00000513394 762 ntBASIC5.61□□□□□ -1.51
RAE1P78406 HSD3BP3-201ENST00000514706 994 ntBASIC5.61□□□□□ -1.51
RAE1P78406 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.61□□□□□ -1.51
RAE1P78406 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.61□□□□□ -1.51
RAE1P78406 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.61□□□□□ -1.51
RAE1P78406 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.61□□□□□ -1.51
RAE1P78406 AGGF1P5-201ENST00000567900 919 ntBASIC5.61□□□□□ -1.51
RAE1P78406 GARSP1-201ENST00000570895 719 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms