Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 GAPDHP24-201ENST00000328713 983 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 RN7SKP160-201ENST00000363804 340 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN18P56856 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN18P56856 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN18P56856 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN18P56856 KRT8P51-201ENST00000438938 274 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 PDCL3P4-201ENST00000489621 720 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN18P56856 ATP5LP3-201ENST00000514223 304 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 RNU6-943P-201ENST00000516960 98 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN18P56856 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 AC015720.2-201ENST00000567709 334 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN18P56856 AC087468.1-201ENST00000604365 630 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 AC025574.2-201ENST00000615621 514 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 MRRFP1-201ENST00000435941 1675 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 AC093849.1-201ENST00000563631 2209 ntBASIC5.04□□□□□ -1.6
CLDN18P56856 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CLDN18P56856 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN18P56856 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN18P56856 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 RNU1-136P-201ENST00000384181 164 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AL391361.1-201ENST00000405580 489 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 GNG5P5-201ENST00000420444 220 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 BX119904.3-201ENST00000428194 957 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC019185.1-201ENST00000442718 389 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN18P56856 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC021146.10-201ENST00000515628 706 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN18P56856 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC007225.2-201ENST00000562529 256 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN18P56856 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC012616.1-201ENST00000600294 197 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 OR51C1P-201ENST00000608504 942 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC079395.2-201ENST00000610982 737 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 AP003072.5-201ENST00000623872 773 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN18P56856 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN18P56856 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLDN18P56856 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN18P56856 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 AC004158.1-201ENST00000564508 4319 ntBASIC5.03□□□□□ -1.6
CLDN18P56856 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CLDN18P56856 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN18P56856 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN18P56856 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN18P56856 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN18P56856 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLDN18P56856 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms