Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC016745.2-201ENST00000608834 3443 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC023490.2-201ENST00000359859 470 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 RN7SKP292-201ENST00000365522 317 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC016739.1-201ENST00000405359 345 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 RN7SKP29-201ENST00000410957 272 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AL354868.1-201ENST00000417077 482 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 TUBB4BP6-201ENST00000437576 479 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 RN7SL57P-201ENST00000493687 290 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 IGKV3D-34-201ENST00000522638 302 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC113192.3-201ENST00000529152 742 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC091078.2-201ENST00000557145 559 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 ZNF322P1-201ENST00000568013 1209 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 COX6CP7-201ENST00000597056 208 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC091057.3-201ENST00000602684 733 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC146944.4-201ENST00000602697 718 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC009159.2-201ENST00000617603 606 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC026124.2-201ENST00000621847 656 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC068787.1-201ENST00000623908 691 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 AC013437.2-201ENST00000639587 677 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 OR8G3P-202ENST00000641572 1255 ntBASIC6.23□□□□□ -1.41
CACNA2D1P54289 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CACNA2D1P54289 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CACNA2D1P54289 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 NEPNP-201ENST00000404786 1371 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 RN7SKP269-201ENST00000365545 319 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CACNA2D1P54289 RNA5SP284-201ENST00000384547 118 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 ANAPC10P1-201ENST00000395991 556 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 MYL6P5-201ENST00000412707 459 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 CDY17P-201ENST00000414121 1282 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 TRGV7-201ENST00000427089 353 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL590399.2-201ENST00000427536 309 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC104843.2-201ENST00000427666 297 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC092634.2-201ENST00000428146 1010 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC073508.1-201ENST00000428866 656 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 MRPL50P1-201ENST00000431951 384 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 SUMO2P3-201ENST00000438311 288 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL663074.2-201ENST00000440621 479 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC108729.2-201ENST00000476543 840 ntBASIC6.22□□□□□ -1.41
CACNA2D1P54289 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.22□□□□□ -1.41
CACNA2D1P54289 AC119751.5-201ENST00000514077 770 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms