Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.89□□□□□ -1.47
LHX1P48742 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.89□□□□□ -1.47
LHX1P48742 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.89□□□□□ -1.47
LHX1P48742 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 AL137058.3-201ENST00000624531 3099 ntBASIC5.88□□□□□ -1.47
LHX1P48742 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LHX1P48742 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LHX1P48742 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 GABARAPL3-201ENST00000412799 354 ntBASIC5.88□□□□□ -1.47
LHX1P48742 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.88□□□□□ -1.47
LHX1P48742 HMGB1P32-201ENST00000425971 565 ntBASIC5.88□□□□□ -1.47
LHX1P48742 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.88□□□□□ -1.47
LHX1P48742 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.88□□□□□ -1.47
LHX1P48742 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 OR5AM1P-201ENST00000532136 1032 ntBASIC5.88□□□□□ -1.47
LHX1P48742 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.88□□□□□ -1.47
LHX1P48742 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 AC018809.2-201ENST00000602436 3823 ntBASIC5.88□□□□□ -1.47
LHX1P48742 AL359513.1-201ENST00000614364 557 ntBASIC5.88□□□□□ -1.47
LHX1P48742 WBP1LP8-201ENST00000617401 327 ntBASIC5.88□□□□□ -1.47
LHX1P48742 MIR6837-201ENST00000620884 64 ntBASIC5.88□□□□□ -1.47
LHX1P48742 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
LHX1P48742 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.88□□□□□ -1.47
LHX1P48742 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
LHX1P48742 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LHX1P48742 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
LHX1P48742 AC137056.2-201ENST00000624055 1958 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC068870.1-201ENST00000563737 2455 ntBASIC5.87□□□□□ -1.47
LHX1P48742 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.87□□□□□ -1.47
LHX1P48742 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LHX1P48742 RNU6-316P-201ENST00000391027 107 ntBASIC5.87□□□□□ -1.47
LHX1P48742 RN7SKP59-201ENST00000410520 314 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 MARK2P12-201ENST00000420129 585 ntBASIC5.87□□□□□ -1.47
LHX1P48742 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 CFL1P1-202ENST00000432948 411 ntBASIC5.87□□□□□ -1.47
LHX1P48742 CYCSP12-201ENST00000437729 300 ntBASIC5.87□□□□□ -1.47
LHX1P48742 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.87□□□□□ -1.47
LHX1P48742 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 AC105399.1-202ENST00000447303 205 ntBASIC5.87□□□□□ -1.47
LHX1P48742 IGBP1P3-201ENST00000447449 1000 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 RN7SL188P-201ENST00000469842 285 ntBASIC5.87□□□□□ -1.47
LHX1P48742 OR2AO1P-201ENST00000476497 403 ntBASIC5.87□□□□□ -1.47
LHX1P48742 TRBV8-1-201ENST00000481590 279 ntBASIC5.87□□□□□ -1.47
LHX1P48742 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 RN7SL284P-201ENST00000498823 275 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.87□□□□□ -1.47
LHX1P48742 AC025423.2-201ENST00000537570 439 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC090022.1-201ENST00000546569 311 ntBASIC5.87□□□□□ -1.47
LHX1P48742 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 MIR4489-201ENST00000578869 62 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.87□□□□□ -1.47
LHX1P48742 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 AC138473.1-201ENST00000605717 526 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AL353729.2-201ENST00000605859 1249 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC000068.2-201ENST00000608816 460 ntBASIC5.87□□□□□ -1.47
LHX1P48742 AC009120.7-201ENST00000623452 780 ntBASIC5.87□□□□□ -1.47
LHX1P48742 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LHX1P48742 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LHX1P48742 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.87□□□□□ -1.47
LHX1P48742 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.87□□□□□ -1.47
LHX1P48742 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms