Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SCARNA20.4-201ENST00000516969 131 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.4□□□□□ -1.39
NEDD4P46934 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.4□□□□□ -1.39
NEDD4P46934 AC007786.3-201ENST00000615154 596 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 AC021766.1-201ENST00000624404 741 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.4□□□□□ -1.39
NEDD4P46934 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.4□□□□□ -1.39
NEDD4P46934 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
NEDD4P46934 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NEDD4P46934 DNM1P47-203ENST00000571780 12667 ntBASIC6.4□□□□□ -1.39
NEDD4P46934 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
NEDD4P46934 AL137058.3-201ENST00000624531 3099 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.39□□□□□ -1.39
NEDD4P46934 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
NEDD4P46934 AL133482.1-201ENST00000415988 498 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.39□□□□□ -1.39
NEDD4P46934 DSTNP5-201ENST00000427921 523 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.39□□□□□ -1.39
NEDD4P46934 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NEDD4P46934 COPS8P2-201ENST00000473228 627 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.39□□□□□ -1.39
NEDD4P46934 HMGB1P44-201ENST00000508597 572 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC111000.6-201ENST00000514471 709 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 SCARNA16.4-201ENST00000516956 187 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC079064.1-201ENST00000528365 362 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.39□□□□□ -1.39
NEDD4P46934 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.39□□□□□ -1.39
NEDD4P46934 RPL10P14-201ENST00000565265 298 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC106730.2-201ENST00000566641 540 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.39□□□□□ -1.39
NEDD4P46934 AC108738.1-201ENST00000603703 237 ntBASIC6.39□□□□□ -1.39
NEDD4P46934 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.39□□□□□ -1.39
NEDD4P46934 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.39□□□□□ -1.39
NEDD4P46934 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NEDD4P46934 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.39□□□□□ -1.39
NEDD4P46934 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NEDD4P46934 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NEDD4P46934 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NEDD4P46934 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEDD4P46934 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD4P46934 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NEDD4P46934 RNU6-171P-201ENST00000384354 107 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC009784.1-201ENST00000426484 460 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD4P46934 SPRYD7P1-201ENST00000443861 570 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 RN7SL197P-201ENST00000466981 299 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD4P46934 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC092754.1-201ENST00000472975 479 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 RPS4XP1-201ENST00000482189 787 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 AC011411.1-201ENST00000509592 876 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.38□□□□□ -1.39
NEDD4P46934 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.38□□□□□ -1.39
NEDD4P46934 RNU6-941P-201ENST00000516346 108 ntBASIC6.38□□□□□ -1.39
NEDD4P46934 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NEDD4P46934 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD4P46934 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.38□□□□□ -1.39
NEDD4P46934 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEDD4P46934 AC006600.2-201ENST00000624834 2506 ntBASIC6.37□□□□□ -1.39
NEDD4P46934 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD4P46934 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD4P46934 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
NEDD4P46934 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
NEDD4P46934 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD4P46934 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NEDD4P46934 SNORA70.6-201ENST00000383934 134 ntBASIC6.37□□□□□ -1.39
NEDD4P46934 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.37□□□□□ -1.39
NEDD4P46934 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms