Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDGFRAP16234 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFRAP16234 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 AC015799.1-201ENST00000622996 3122 ntBASIC5.92□□□□□ -1.46
PDGFRAP16234 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFRAP16234 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC068870.1-201ENST00000563737 2455 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC004656.1-201ENST00000568479 4951 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL121886.1-201ENST00000358609 435 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 RNU6-1331P-201ENST00000363658 106 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 RN7SKP286-201ENST00000410894 299 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 RMRPP5-201ENST00000411156 267 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC234781.4-201ENST00000419384 244 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 RPL34P3-201ENST00000421454 338 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC009963.4-201ENST00000448535 339 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 RN7SL174P-201ENST00000475578 289 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AC087672.1-201ENST00000479876 766 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 RN7SL101P-201ENST00000496350 279 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.91□□□□□ -1.46
PDGFRAP16234 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC010547.6-201ENST00000571789 193 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC015712.7-201ENST00000615211 635 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.91□□□□□ -1.46
PDGFRAP16234 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.91□□□□□ -1.46
PDGFRAP16234 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDGFRAP16234 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 AC232271.1-201ENST00000602455 2715 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFRAP16234 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFRAP16234 HSPD1P7-201ENST00000447985 1686 ntBASIC5.91□□□□□ -1.46
PDGFRAP16234 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFRAP16234 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
PDGFRAP16234 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFRAP16234 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDGFRAP16234 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDGFRAP16234 U3.23-201ENST00000391132 200 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 RNU2-22P-201ENST00000411266 212 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AL356968.2-201ENST00000412769 1257 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AL662874.1-201ENST00000426065 230 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 RAB9AP5-201ENST00000437794 597 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 RAB9AP2-201ENST00000443911 597 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 SNORD125-201ENST00000459538 96 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.9□□□□□ -1.46
PDGFRAP16234 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFRAP16234 GLUD1P3-202ENST00000508551 200 ntBASIC5.9□□□□□ -1.46
PDGFRAP16234 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFRAP16234 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFRAP16234 RNU6-615P-201ENST00000516065 106 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms