Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 Z83820.1-201ENST00000456978 1499 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 RNU1-77P-201ENST00000390868 162 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 OR4K12P-201ENST00000406538 961 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 CHEK2P5-201ENST00000423877 246 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 RN7SL174P-201ENST00000475578 289 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 RN7SL184P-201ENST00000488308 297 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC130364.2-201ENST00000528639 604 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 RN7SL356P-201ENST00000582228 248 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 MIR7853-201ENST00000584820 132 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 FAM72A-208ENST00000607379 1139 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC007204.2-201ENST00000615022 616 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 AC099654.6-201ENST00000636487 512 ntBASIC5.48□□□□□ -1.53
HLA-DQB2P05538 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DQB2P05538 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 MIR323A-201ENST00000362199 86 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AL512422.1-201ENST00000407033 553 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 NAP1L4P2-201ENST00000425958 899 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 RPS27AP6-201ENST00000427962 448 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 RN7SL101P-201ENST00000496350 279 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 RPEP1-201ENST00000504507 658 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC097486.1-201ENST00000515331 210 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC012146.2-201ENST00000576545 416 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AL359513.1-201ENST00000614364 557 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AC005899.7-201ENST00000618199 588 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DQB2P05538 AL078621.3-201ENST00000623707 2042 ntBASIC5.47□□□□□ -1.53
HLA-DQB2P05538 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-DQB2P05538 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 RNA5SP132-201ENST00000364725 118 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 CYCSP12-201ENST00000437729 300 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC058823.1-201ENST00000485315 474 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AL136038.1-201ENST00000497246 351 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 OR51A1P-201ENST00000511110 946 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 CDC42P3-201ENST00000518493 633 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC005341.1-201ENST00000571086 708 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC060766.1-201ENST00000590824 627 ntBASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DQB2P05538 AC109583.2-201ENST00000617367 129 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms