Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC006963.1-201ENST00000624003 1052 ntBASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 AC003992.1-201ENST00000635364 557 ntBASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 AC027088.4-201ENST00000611559 1947 ntBASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 AC008957.3-201ENST00000624112 2242 ntBASIC6.99□□□□□ -1.29
CTDP1Q9Y5B0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 TTC41P-205ENST00000551270 3963 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL355377.1-201ENST00000621125 1653 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 SNORA27.3-201ENST00000364937 134 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 RNU6-152P-201ENST00000384037 107 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC245060.4-201ENST00000413293 1121 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 UBE2D3P3-201ENST00000426992 425 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 MTND6P12-201ENST00000428247 522 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL645931.1-201ENST00000439737 410 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 RPL36AP39-201ENST00000445859 318 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 OR6C72P-201ENST00000451403 892 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 DUXAP8-207ENST00000456786 622 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 COX6CP7-201ENST00000597056 208 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC091193.1-201ENST00000604640 448 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL136131.3-201ENST00000607600 188 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC084036.1-201ENST00000609190 508 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 DUXAP10-204ENST00000612052 616 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 MIR6809-201ENST00000612189 116 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC026367.3-201ENST00000619032 590 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC007683.2-201ENST00000624681 714 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL357562.1-201ENST00000624911 609 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC119674.1-220ENST00000641502 1048 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 OR8G3P-202ENST00000641572 1255 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC106872.5-201ENST00000508856 1416 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC015689.2-201ENST00000528172 1738 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AP000432.2-201ENST00000624164 2048 ntBASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTDP1Q9Y5B0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 RNU6-670P-201ENST00000364312 104 ntBASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC126120.1-201ENST00000431082 470 ntBASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 MRPS33P4-201ENST00000434892 317 ntBASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AL445665.1-202ENST00000452436 324 ntBASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 RPSAP37-201ENST00000470913 821 ntBASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.97□□□□□ -1.29
CTDP1Q9Y5B0 RNU6-943P-201ENST00000516960 98 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms