Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4BQ9Y4P1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ATG4BQ9Y4P1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4BQ9Y4P1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC068870.1-201ENST00000563737 2455 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC025470.1-201ENST00000510053 2032 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 RN7SKP69-201ENST00000365390 305 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC005042.1-201ENST00000393397 800 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 BX119321.1-201ENST00000428912 797 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AL161636.2-201ENST00000445179 927 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 RPS3AP15-201ENST00000483874 781 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 OR7E157P-201ENST00000494376 911 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 NPM1P52-201ENST00000518264 846 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AP001496.3-201ENST00000580230 913 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 QTRT1P1-201ENST00000604344 1078 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AL353729.2-201ENST00000605859 1249 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 MIR193BHG-214ENST00000641765 509 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 AL034546.1-201ENST00000623740 3693 ntBASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4BQ9Y4P1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AC245100.2-201ENST00000454544 1679 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 SRRM1P3-201ENST00000426911 2678 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 GAPDHP24-201ENST00000328713 983 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 PEX12P1-201ENST00000400284 1048 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL035696.2-201ENST00000407941 709 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 RMRPP5-201ENST00000411156 267 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL034379.1-201ENST00000423216 253 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 PRUNEP1-201ENST00000425846 705 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 RAB9AP5-201ENST00000437794 597 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL391987.1-201ENST00000441025 200 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 RAB9AP2-201ENST00000443911 597 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 HMGN1P36-201ENST00000446623 298 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 SUMO2P4-201ENST00000504193 276 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 SNORA70.11-201ENST00000515987 138 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 RNU6-615P-201ENST00000516065 106 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 SNORA70.13-201ENST00000516116 138 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AC126175.1-201ENST00000617041 758 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AL390318.1-201ENST00000624564 687 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 AC125336.1-201ENST00000508893 2827 ntBASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4BQ9Y4P1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms