Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AP001804.2-201ENST00000533932 910 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 VN1R81P-201ENST00000602085 372 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 FAM27E4-201ENST00000605259 342 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AP003400.2-201ENST00000624036 666 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AC073593.1-201ENST00000624500 411 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.95□□□□□ -1.62
RHBDD3Q9Y3P4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC007938.2-201ENST00000604666 2634 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP326-201ENST00000363209 110 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RN7SKP187-201ENST00000365536 330 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 MIR130A-201ENST00000385274 89 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 VN1R31P-201ENST00000417498 730 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 BX323845.3-201ENST00000428215 527 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RN7SL72P-201ENST00000460697 269 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RN7SL168P-201ENST00000463821 279 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RN7SL170P-201ENST00000487098 295 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 NPM1P28-201ENST00000492269 840 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 DUTP1-201ENST00000493631 470 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC139365.2-201ENST00000517972 253 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 DHFRP1-201ENST00000579682 559 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC067838.1-201ENST00000606064 577 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 AC024884.1-201ENST00000620583 399 ntBASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.94□□□□□ -1.62
RHBDD3Q9Y3P4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AC104964.3-201ENST00000606115 2860 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 RNA5SP500-201ENST00000364486 119 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AC005042.1-201ENST00000393397 800 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 HMGB3P7-201ENST00000400214 611 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AC096921.1-201ENST00000411661 375 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 SMC4P1-201ENST00000414479 527 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AC009784.1-201ENST00000426484 460 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 PCBP2P1-201ENST00000437262 977 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 RNF19BPY-201ENST00000458209 1550 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 ABCC13-202ENST00000463099 3842 ntBASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.93□□□□□ -1.62
RHBDD3Q9Y3P4 RPL37P23-201ENST00000492641 294 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms