Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL12P12-201ENST00000424633 501 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MTCO2P1-201ENST00000424648 477 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 HMGB3P5-201ENST00000428894 612 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 RPS29P14-201ENST00000431518 171 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 TXNP2-201ENST00000443918 295 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MOB1AP2-201ENST00000446060 614 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 FTLP8-201ENST00000446770 267 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC074386.1-201ENST00000476560 767 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC093719.1-201ENST00000480427 441 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 RPL7P51-201ENST00000490532 749 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MTND2P38-201ENST00000522536 667 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 OR7E13P-201ENST00000526052 910 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC009974.1-201ENST00000608881 455 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AP001033.2-201ENST00000609701 1003 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC245014.3-201ENST00000618589 347 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC068057.2-201ENST00000624047 895 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC099654.8-201ENST00000637757 681 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 AC092111.2-201ENST00000611627 1414 ntBASIC6.16□□□□□ -1.42
DKK3Q9UBP4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
DKK3Q9UBP4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AC087516.1-201ENST00000561236 2428 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AC087565.3-202ENST00000642085 1603 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 MIR133A2-201ENST00000347538 102 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 SNORD115-48-201ENST00000364764 76 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL096829.1-201ENST00000413677 457 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 RPS15AP30-201ENST00000420976 390 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 RPL5P2-201ENST00000429598 854 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 ZNF965P-201ENST00000432501 817 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL512593.1-201ENST00000444758 779 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 RPL23AP60-201ENST00000450011 454 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AL139824.2-201ENST00000458731 1095 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 CABYRP1-201ENST00000465493 1045 ntBASIC6.15□□□□□ -1.42
DKK3Q9UBP4 AC098847.1-201ENST00000473094 348 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms