Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC123912.3-201ENST00000600907 1367 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 RNU1-136P-201ENST00000384181 164 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 MIR551A-201ENST00000385042 96 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 Z93019.1-201ENST00000416450 973 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 RNF10P1-201ENST00000418589 369 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 KRT8P51-201ENST00000438938 274 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 BX679664.2-201ENST00000439282 283 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 PDCL3P4-201ENST00000489621 720 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 PMS2P3-207ENST00000529061 717 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 NPM1P42-201ENST00000560329 862 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL583832.1-201ENST00000603227 784 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL359513.1-201ENST00000614364 557 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC005840.5-201ENST00000619166 599 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC132825.8-201ENST00000640783 297 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC025470.1-201ENST00000510053 2032 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AC026523.2-201ENST00000625039 7739 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL158152.1-201ENST00000602652 1435 ntBASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLCF1Q9UBD9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLCF1Q9UBD9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.96□□□□□ -1.61
CLCF1Q9UBD9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.96□□□□□ -1.61
CLCF1Q9UBD9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 MSL3P1-202ENST00000440028 1468 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 RN7SKP6-201ENST00000364795 319 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC009804.1-201ENST00000400949 179 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AL355433.1-201ENST00000422804 300 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 TMEM183AP1-205ENST00000432739 290 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC092106.1-201ENST00000444291 373 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AL596266.1-201ENST00000448132 400 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC009963.4-201ENST00000448535 339 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC110749.1-201ENST00000462007 357 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 UBA52P7-201ENST00000486088 380 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 FKBP1AP1-201ENST00000594588 318 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 CASC19-264ENST00000641912 1184 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCF1Q9UBD9 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 RNA5SP326-201ENST00000363209 110 ntBASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCF1Q9UBD9 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms