Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC006116.7-201ENST00000590141 756 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC009120.7-201ENST00000623452 780 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC000095.2-202ENST00000637415 154 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 AC110792.3-201ENST00000595906 1614 ntBASIC6.1□□□□□ -1.43
USP29Q9HBJ7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.1□□□□□ -1.43
USP29Q9HBJ7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AL161912.4-201ENST00000623889 2468 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC137056.2-201ENST00000624055 1958 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC109446.4-201ENST00000623235 2755 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC092451.3-201ENST00000625067 1343 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 RN7SKP81-201ENST00000365603 331 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 MIR130B-202ENST00000385018 82 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC099677.3-201ENST00000427081 395 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AL391987.1-201ENST00000441025 200 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 RPS7P3-201ENST00000443360 580 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 RPL31P15-201ENST00000449770 338 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 RN7SL269P-201ENST00000467795 305 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC078857.1-201ENST00000469870 667 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 PFN1P6-201ENST00000476786 399 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC108157.1-201ENST00000510511 539 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 MTATP6P1-201ENST00000514057 681 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC112198.4-201ENST00000515450 351 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 SCARNA18.1-201ENST00000516330 83 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 NPM1P52-201ENST00000518264 846 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC093524.1-201ENST00000564266 1094 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC079148.1-201ENST00000565944 819 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC027216.1-201ENST00000577726 685 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 OOSP1P2-201ENST00000579644 351 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC073333.2-201ENST00000603589 769 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 KATNBL1P5-201ENST00000605015 517 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC097504.2-201ENST00000608088 454 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AC091046.2-201ENST00000620775 665 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 AL138955.1-201ENST00000622881 1040 ntBASIC6.09□□□□□ -1.43
USP29Q9HBJ7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USP29Q9HBJ7 PSG10P-201ENST00000501199 1500 ntBASIC6.09□□□□□ -1.44
USP29Q9HBJ7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
USP29Q9HBJ7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.44
USP29Q9HBJ7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USP29Q9HBJ7 GNL2P1-201ENST00000451274 2190 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RBPJP7-201ENST00000442803 1447 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RBPJP5-201ENST00000449433 1447 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RN7SKP69-201ENST00000365390 305 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RNA5SP284-201ENST00000384547 118 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL512422.1-201ENST00000407033 553 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL590399.4-201ENST00000436561 601 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC073109.1-201ENST00000445066 978 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RSU1P1-201ENST00000453416 441 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 FRG2FP-204ENST00000453982 852 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC007998.1-201ENST00000474156 672 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms