Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 MIR223-201ENST00000385204 110 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 MIR105-1-201ENST00000385222 81 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 RNU4-34P-201ENST00000410431 124 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC093827.1-201ENST00000480094 861 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 IGBP1P4-201ENST00000503202 879 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 IMPA1P1-201ENST00000510718 842 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC233699.1-201ENST00000569955 1168 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC009027.1-201ENST00000604510 479 ntBASIC8.36□□□□□ -1.07
VPS8Q8N3P4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
VPS8Q8N3P4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 MAX-203ENST00000341653 330 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 PTMAP6-201ENST00000439110 327 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC026348.1-201ENST00000462549 1053 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 HMGN1P9-201ENST00000515212 298 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC134349.2-201ENST00000535136 910 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 uc_338.7-201ENST00000621834 124 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 LINC01739-205ENST00000641890 573 ntBASIC8.35□□□□□ -1.07
VPS8Q8N3P4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.35□□□□□ -1.07
VPS8Q8N3P4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 NUDT19P3-201ENST00000404698 555 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 U3.36-201ENST00000408418 213 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 AC090804.1-201ENST00000448870 490 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 RPS24P16-201ENST00000497294 392 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 AC022832.1-201ENST00000530718 645 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 MIR4420-201ENST00000583944 77 ntBASIC8.34□□□□□ -1.07
VPS8Q8N3P4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
VPS8Q8N3P4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
VPS8Q8N3P4 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.08
VPS8Q8N3P4 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.33□□□□□ -1.08
VPS8Q8N3P4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 OR9G4-201ENST00000302957 984 ntBASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AC004825.1-201ENST00000555068 586 ntBASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 MIR7853-201ENST00000584820 132 ntBASIC8.33□□□□□ -1.08
VPS8Q8N3P4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.33□□□□□ -1.08
VPS8Q8N3P4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 RNU1-43P-201ENST00000365052 165 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 SNORA70.6-201ENST00000383934 134 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC016769.2-201ENST00000414815 475 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 MTND2P40-201ENST00000436718 841 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 PSAT1P4-201ENST00000466500 526 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC008410.1-201ENST00000483777 339 ntBASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC8.32□□□□□ -1.08
VPS8Q8N3P4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms