Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DSTNP2-201ENST00000504533 515 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 OR5AM1P-201ENST00000532136 1032 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC005725.1-201ENST00000577346 2607 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC3.23□□□□□ -1.89
HSPG2P98160 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HSPG2P98160 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HSPG2P98160 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.23□□□□□ -1.89
HSPG2P98160 SNORA70F-201ENST00000384142 135 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.23□□□□□ -1.89
HSPG2P98160 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.23□□□□□ -1.89
HSPG2P98160 NANOGP9-201ENST00000439890 892 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.23□□□□□ -1.89
HSPG2P98160 AL022319.1-201ENST00000458183 1167 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.23□□□□□ -1.89
HSPG2P98160 AC069200.1-201ENST00000609511 323 ntBASIC3.23□□□□□ -1.89
HSPG2P98160 AC007998.4-201ENST00000612496 2533 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 HSPA8P15-201ENST00000401676 786 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 KCTD9P4-201ENST00000526766 1166 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC021106.3-201ENST00000623925 531 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HSPG2P98160 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 AL450345.1-202ENST00000605741 3881 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.22□□□□□ -1.89
HSPG2P98160 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.22□□□□□ -1.89
HSPG2P98160 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC090220.1-201ENST00000593078 1699 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC3.22□□□□□ -1.89
HSPG2P98160 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 FAM32BP-201ENST00000344033 333 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 PHBP16-201ENST00000446318 950 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC109464.1-201ENST00000511091 819 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 AC091912.1-201ENST00000511351 248 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 AC073091.2-201ENST00000603205 907 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 ZYXP1-201ENST00000617638 118 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 AC108751.5-201ENST00000492880 1336 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HSPG2P98160 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 RPL23AP17-201ENST00000401064 499 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.22□□□□□ -1.89
HSPG2P98160 RPL12P39-201ENST00000455456 496 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 OSTCP1-201ENST00000455507 450 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.22□□□□□ -1.89
HSPG2P98160 AC020915.5-201ENST00000596836 964 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 AP005131.7-201ENST00000610087 611 ntBASIC3.22□□□□□ -1.89
HSPG2P98160 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
HSPG2P98160 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HSPG2P98160 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HSPG2P98160 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC3.21□□□□□ -1.89
HSPG2P98160 AF186996.5-201ENST00000418098 904 ntBASIC3.21□□□□□ -1.89
HSPG2P98160 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.21□□□□□ -1.89
HSPG2P98160 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC3.21□□□□□ -1.89
HSPG2P98160 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HSPG2P98160 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.21□□□□□ -1.89
HSPG2P98160 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
HSPG2P98160 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC3.21□□□□□ -1.89
HSPG2P98160 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms