Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.47□□□□□ -1.53
SHMT2P34897 AC011445.2-201ENST00000599274 173 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.47□□□□□ -1.53
SHMT2P34897 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.47□□□□□ -1.53
SHMT2P34897 FO393422.1-201ENST00000603908 708 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 AL353729.2-201ENST00000605859 1249 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 AC007786.3-201ENST00000615154 596 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 MIR6133-201ENST00000617057 108 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 AC027279.1-201ENST00000568885 4284 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHMT2P34897 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SHMT2P34897 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHMT2P34897 AC097063.1-201ENST00000426714 1797 ntBASIC5.47□□□□□ -1.53
SHMT2P34897 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHMT2P34897 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHMT2P34897 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHMT2P34897 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
SHMT2P34897 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHMT2P34897 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.46□□□□□ -1.53
SHMT2P34897 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHMT2P34897 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SHMT2P34897 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHMT2P34897 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHMT2P34897 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.46□□□□□ -1.54
SHMT2P34897 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.46□□□□□ -1.54
SHMT2P34897 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 CYCSP51-201ENST00000443545 318 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AP000281.1-201ENST00000444036 316 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 LDHBP2-201ENST00000456969 1005 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AC023141.9-201ENST00000458734 412 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 RPSAP39-201ENST00000467439 883 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 DEFB109A-201ENST00000482450 265 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 GLUD1P3-202ENST00000508551 200 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.46□□□□□ -1.54
SHMT2P34897 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 PMS2P3-207ENST00000529061 717 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AC027544.3-201ENST00000535082 757 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 AC007066.2-202ENST00000566531 914 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 AC020978.7-201ENST00000575953 1187 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.46□□□□□ -1.54
SHMT2P34897 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.46□□□□□ -1.54
SHMT2P34897 PPATP2-201ENST00000605635 508 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHMT2P34897 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 PWAR1-201ENST00000624188 2414 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHMT2P34897 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SHMT2P34897 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHMT2P34897 MAPK10-338ENST00000641647 3362 ntBASIC5.46□□□□□ -1.54
SHMT2P34897 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 AC125336.1-201ENST00000508893 2827 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.45□□□□□ -1.54
SHMT2P34897 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 SNORA70.6-201ENST00000383934 134 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 RNA5SP187-201ENST00000384400 119 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 MIR143-201ENST00000385300 106 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC092642.1-201ENST00000392417 425 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.45□□□□□ -1.54
SHMT2P34897 AL512422.1-201ENST00000407033 553 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 OR6E1P-201ENST00000414424 923 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.45□□□□□ -1.54
SHMT2P34897 AL133173.1-201ENST00000423458 397 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 NAP1L4P2-201ENST00000425958 899 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.45□□□□□ -1.54
SHMT2P34897 AC073909.1-201ENST00000447112 999 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.45□□□□□ -1.54
SHMT2P34897 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHMT2P34897 ATP5LP5-201ENST00000483050 299 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 NPM1P28-201ENST00000492269 840 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC021146.10-201ENST00000515628 706 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 SNORA70.11-201ENST00000515987 138 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 SNORA70.13-201ENST00000516116 138 ntBASIC5.45□□□□□ -1.54
SHMT2P34897 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.45□□□□□ -1.54
SHMT2P34897 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms