Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.59□□□□□ -1.51
XRCC1P18887 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 CU639417.4-201ENST00000623928 207 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 AC007683.2-201ENST00000624681 714 ntBASIC5.59□□□□□ -1.51
XRCC1P18887 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
XRCC1P18887 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
XRCC1P18887 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
XRCC1P18887 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
XRCC1P18887 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
XRCC1P18887 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
XRCC1P18887 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
XRCC1P18887 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 AP004607.3-201ENST00000530354 3915 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 AC005261.6-201ENST00000623072 1387 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.58□□□□□ -1.52
XRCC1P18887 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
XRCC1P18887 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.58□□□□□ -1.52
XRCC1P18887 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
XRCC1P18887 AL596448.1-201ENST00000415024 392 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.58□□□□□ -1.52
XRCC1P18887 AC113412.1-201ENST00000425840 504 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AL450996.1-201ENST00000445574 1202 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC073909.1-201ENST00000447112 999 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 OR7E116P-201ENST00000448529 957 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.58□□□□□ -1.52
XRCC1P18887 AC087672.1-201ENST00000479876 766 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC105384.2-201ENST00000508433 640 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 NPM1P21-201ENST00000513394 762 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.58□□□□□ -1.52
XRCC1P18887 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 AL049872.1-201ENST00000556323 322 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.58□□□□□ -1.52
XRCC1P18887 AL589674.2-201ENST00000604304 337 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC104695.2-201ENST00000605056 775 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 HIRAP1-201ENST00000605318 787 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 AC004477.3-201ENST00000614061 590 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
XRCC1P18887 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.58□□□□□ -1.52
XRCC1P18887 AC125336.1-201ENST00000508893 2827 ntBASIC5.58□□□□□ -1.52
XRCC1P18887 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
XRCC1P18887 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
XRCC1P18887 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.57□□□□□ -1.52
XRCC1P18887 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.57□□□□□ -1.52
XRCC1P18887 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 AC007938.2-201ENST00000604666 2634 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 YES1P1-201ENST00000418510 1628 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 AL137141.1-201ENST00000624622 4836 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 AC104964.3-201ENST00000606115 2860 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 RNA5SP131-201ENST00000365452 119 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 RNA5SP187-201ENST00000384400 119 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AL513325.1-201ENST00000417716 1034 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 RANP7-201ENST00000418085 644 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AC079355.1-201ENST00000421770 223 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 BX119904.3-201ENST00000428194 957 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 EEF1B2P6-201ENST00000445713 673 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.57□□□□□ -1.52
XRCC1P18887 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.57□□□□□ -1.52
XRCC1P18887 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.57□□□□□ -1.52
XRCC1P18887 AC008115.3-201ENST00000614874 549 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AC090607.5-201ENST00000615692 224 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.57□□□□□ -1.52
XRCC1P18887 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.57□□□□□ -1.52
XRCC1P18887 AP003072.5-201ENST00000623872 773 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 AL390318.1-201ENST00000624564 687 ntBASIC5.57□□□□□ -1.52
XRCC1P18887 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.57□□□□□ -1.52
XRCC1P18887 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
XRCC1P18887 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.57□□□□□ -1.52
XRCC1P18887 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
XRCC1P18887 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
XRCC1P18887 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms