Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 CUBNP2-201ENST00000443534 1139 ntBASIC7.54□□□□□ -1.2
LIG1P18858 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.54□□□□□ -1.2
LIG1P18858 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 OSTCP1-201ENST00000455507 450 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RN7SKP198-201ENST00000459286 306 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RN7SL70P-201ENST00000478322 302 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RPS7P11-201ENST00000484240 586 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RN7SL37P-201ENST00000490461 307 ntBASIC7.54□□□□□ -1.2
LIG1P18858 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
LIG1P18858 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 MRPS5P3-201ENST00000515577 166 ntBASIC7.54□□□□□ -1.2
LIG1P18858 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RPL12P22-201ENST00000519073 490 ntBASIC7.54□□□□□ -1.2
LIG1P18858 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 AC022880.1-201ENST00000534017 973 ntBASIC7.54□□□□□ -1.2
LIG1P18858 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 AP000811.1-201ENST00000603803 651 ntBASIC7.54□□□□□ -1.2
LIG1P18858 RNU6-84P-201ENST00000607737 102 ntBASIC7.54□□□□□ -1.2
LIG1P18858 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 MIR6849-201ENST00000618543 69 ntBASIC7.54□□□□□ -1.2
LIG1P18858 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
LIG1P18858 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.54□□□□□ -1.2
LIG1P18858 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
LIG1P18858 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
LIG1P18858 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LIG1P18858 AC062022.1-201ENST00000451026 1684 ntBASIC7.54□□□□□ -1.2
LIG1P18858 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 AC005832.2-201ENST00000538921 1430 ntBASIC7.53□□□□□ -1.2
LIG1P18858 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
LIG1P18858 MAPK10-261ENST00000641050 3109 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
LIG1P18858 RNFT1P3-201ENST00000340898 1052 ntBASIC7.53□□□□□ -1.2
LIG1P18858 FAM32BP-201ENST00000344033 333 ntBASIC7.53□□□□□ -1.2
LIG1P18858 RNU6-252P-201ENST00000363232 107 ntBASIC7.53□□□□□ -1.2
LIG1P18858 RNU4-75P-201ENST00000364621 146 ntBASIC7.53□□□□□ -1.2
LIG1P18858 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.53□□□□□ -1.2
LIG1P18858 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
LIG1P18858 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 RPL34P27-201ENST00000428810 349 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AL161722.1-201ENST00000446972 1032 ntBASIC7.53□□□□□ -1.2
LIG1P18858 MTND6P5-201ENST00000448266 512 ntBASIC7.53□□□□□ -1.2
LIG1P18858 NDUFA12P1-201ENST00000455914 406 ntBASIC7.53□□□□□ -1.2
LIG1P18858 CCNJP2-201ENST00000457810 1163 ntBASIC7.53□□□□□ -1.2
LIG1P18858 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 AC080014.1-201ENST00000496877 1201 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC133963.2-201ENST00000513686 578 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC084337.1-201ENST00000524809 686 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.53□□□□□ -1.2
LIG1P18858 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AC087897.1-201ENST00000550134 156 ntBASIC7.53□□□□□ -1.2
LIG1P18858 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
LIG1P18858 AC023310.2-201ENST00000553844 547 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC090695.1-201ENST00000561269 1222 ntBASIC7.53□□□□□ -1.2
LIG1P18858 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.53□□□□□ -1.2
LIG1P18858 AC027796.1-201ENST00000575593 512 ntBASIC7.53□□□□□ -1.2
LIG1P18858 ZNF415P1-201ENST00000582279 1166 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC024267.2-201ENST00000582737 417 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.53□□□□□ -1.2
LIG1P18858 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 AL031601.1-201ENST00000605702 394 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AL513477.2-201ENST00000607858 568 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 TCL6_3.1-201ENST00000619064 137 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
LIG1P18858 AC018692.2-201ENST00000624130 348 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AL359740.1-201ENST00000624340 592 ntBASIC7.53□□□□□ -1.2
LIG1P18858 AC092159.4-201ENST00000624944 550 ntBASIC7.53□□□□□ -1.2
LIG1P18858 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.53□□□□□ -1.2
LIG1P18858 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms