Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC090602.1-201ENST00000469695 252 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AC105420.1-201ENST00000504389 582 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AP006245.2-201ENST00000522004 300 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 AC084824.2-201ENST00000548906 345 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.63□□□□□ -1.51
LDLRP01130 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.63□□□□□ -1.51
LDLRP01130 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 AL163952.1-202ENST00000569625 600 ntBASIC5.63□□□□□ -1.51
LDLRP01130 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.63□□□□□ -1.51
LDLRP01130 AC020915.5-201ENST00000596836 964 ntBASIC5.63□□□□□ -1.51
LDLRP01130 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.63□□□□□ -1.51
LDLRP01130 AL133481.2-203ENST00000607558 139 ntBASIC5.63□□□□□ -1.51
LDLRP01130 AP000240.1-201ENST00000609910 452 ntBASIC5.63□□□□□ -1.51
LDLRP01130 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.63□□□□□ -1.51
LDLRP01130 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.63□□□□□ -1.51
LDLRP01130 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 AC024651.2-201ENST00000562480 2098 ntBASIC5.63□□□□□ -1.51
LDLRP01130 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LDLRP01130 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LDLRP01130 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 DDX18P6-201ENST00000450119 1997 ntBASIC5.62□□□□□ -1.51
LDLRP01130 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 AC130304.1-201ENST00000622942 2385 ntBASIC5.62□□□□□ -1.51
LDLRP01130 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 RNU6-819P-201ENST00000364116 107 ntBASIC5.62□□□□□ -1.51
LDLRP01130 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 RNU6-564P-201ENST00000410983 104 ntBASIC5.62□□□□□ -1.51
LDLRP01130 MTND2P40-201ENST00000436718 841 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC064862.4-201ENST00000442180 334 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 AP000281.1-201ENST00000444036 316 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC017099.1-201ENST00000448261 1028 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AP006222.1-205ENST00000450734 457 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 TAAR4P-201ENST00000454843 1039 ntBASIC5.62□□□□□ -1.51
LDLRP01130 C1DP3-201ENST00000455013 423 ntBASIC5.62□□□□□ -1.51
LDLRP01130 RPL12P39-201ENST00000455456 496 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AL356390.1-201ENST00000455684 397 ntBASIC5.62□□□□□ -1.51
LDLRP01130 RN7SL515P-201ENST00000463999 297 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC093827.1-201ENST00000480094 861 ntBASIC5.62□□□□□ -1.51
LDLRP01130 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AC026782.2-201ENST00000510845 636 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.62□□□□□ -1.51
LDLRP01130 RNA5SP362-201ENST00000516048 118 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 IGLV2-28-201ENST00000520681 304 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 AC078899.1-201ENST00000521432 1185 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AP000619.2-201ENST00000546014 969 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AC126615.2-201ENST00000553003 515 ntBASIC5.62□□□□□ -1.51
LDLRP01130 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 AP001823.1-201ENST00000604056 1003 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AC108673.3-201ENST00000609183 335 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AP005131.7-201ENST00000610087 611 ntBASIC5.62□□□□□ -1.51
LDLRP01130 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LDLRP01130 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 MTCO1P7-201ENST00000419523 1542 ntBASIC5.62□□□□□ -1.51
LDLRP01130 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 AC008627.1-201ENST00000517511 1704 ntBASIC5.62□□□□□ -1.51
LDLRP01130 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.62□□□□□ -1.51
LDLRP01130 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LDLRP01130 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.62□□□□□ -1.51
LDLRP01130 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 AC020633.1-201ENST00000468439 2247 ntBASIC5.62□□□□□ -1.51
LDLRP01130 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LDLRP01130 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LDLRP01130 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms