Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MIR2117-201ENST00000516780 80 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 RNU6-943P-201ENST00000516960 98 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 AL163952.1-202ENST00000569625 600 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 AL390318.1-201ENST00000624564 687 ntBASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA1Q9UND3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL355433.1-201ENST00000422804 300 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL121578.1-201ENST00000428051 892 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 RPS12P17-201ENST00000438591 377 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 RSU1P1-201ENST00000453416 441 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 RN7SL72P-201ENST00000460697 269 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC026348.1-201ENST00000462549 1053 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 TRBV8-1-201ENST00000481590 279 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC008638.1-201ENST00000506035 866 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 IGKV2-18-201ENST00000522607 343 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL121594.2-201ENST00000541658 472 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC016180.1-201ENST00000567945 403 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 MIR4443-201ENST00000585052 53 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC006115.2-201ENST00000596823 202 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL035661.1-201ENST00000620459 1144 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 AL360270.2-201ENST00000562952 5985 ntBASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.26□□□□□ -1.57
NPIPA1Q9UND3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 RN7SKP17-201ENST00000411242 351 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 NPM1P4-201ENST00000414095 812 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 BMS1P13-201ENST00000417301 885 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 CRIP1P1-201ENST00000427567 185 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 AC096775.1-201ENST00000437724 448 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 KRT8P51-201ENST00000438938 274 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 AC005297.1-201ENST00000444765 862 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 AC104849.1-201ENST00000462623 405 ntBASIC5.25□□□□□ -1.57
NPIPA1Q9UND3 AL133445.1-201ENST00000467051 452 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms