Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 OR9K1P-201ENST00000326513 941 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 SNORD56.6-201ENST00000384569 71 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL035696.2-201ENST00000407941 709 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 RNA5SP431-201ENST00000410312 120 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 RPL35AP3-201ENST00000414680 288 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 HYALP1-201ENST00000417674 1279 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 VN1R20P-201ENST00000425215 966 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC007679.3-201ENST00000434035 414 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 PPIAP7-201ENST00000454070 489 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 TAAR4P-201ENST00000454843 1039 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC063955.1-201ENST00000462872 685 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AP000797.2-201ENST00000475768 606 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 EIF4E2P2-201ENST00000492033 736 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AP000620.1-201ENST00000527147 504 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 OR5AM1P-201ENST00000532136 1032 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC091078.2-201ENST00000557145 559 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 MRPS21P8-201ENST00000569196 235 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC007346.1-201ENST00000569208 867 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 H3F3BP2-201ENST00000583907 357 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 VN1R81P-201ENST00000602085 372 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL136131.3-201ENST00000607600 188 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC012511.1-201ENST00000608140 449 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL356608.1-201ENST00000610034 820 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 MIR6070-201ENST00000613967 103 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC104964.3-201ENST00000606115 2860 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC022306.1-201ENST00000560489 1562 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 MIR188-201ENST00000385034 86 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 RNA5SP241-201ENST00000391326 114 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 RPL7AP51-201ENST00000422016 760 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 SNRPFP2-201ENST00000440710 251 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 RN7SL269P-201ENST00000467795 305 ntBASIC4.67□□□□□ -1.66
CCDC71LQ8N9Z2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms