Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 BCORP1-203ENST00000513194 5093 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC107977.1-201ENST00000355745 939 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 RN7SKP275-201ENST00000364626 301 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 RNU6-891P-201ENST00000384280 111 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC096921.1-201ENST00000411661 375 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 RNGTTP1-201ENST00000420965 728 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC066692.1-201ENST00000421721 457 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 OR5W1P-201ENST00000423705 938 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AL451063.1-201ENST00000450164 1133 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ATP5G1P3-201ENST00000463301 410 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 RPS17P15-201ENST00000475609 349 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC009120.1-201ENST00000493458 473 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC022826.1-201ENST00000519383 805 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 BCAS2P1-201ENST00000528022 632 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AP000648.1-201ENST00000529682 397 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 DHFRP1-201ENST00000579682 559 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AL031601.1-201ENST00000605702 394 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 MIR7109-201ENST00000613748 65 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC009032.1-201ENST00000617574 431 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC004777.1-201ENST00000624317 287 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC140134.1-201ENST00000511830 3544 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC007842.1-201ENST00000597336 2039 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC114774.1-201ENST00000507410 1770 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AP001002.1-201ENST00000625148 1513 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 OR7E25P-201ENST00000344844 931 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 RNA5SP326-201ENST00000363209 110 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 RN7SKP187-201ENST00000365536 330 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SUGT1P2-201ENST00000379452 992 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AKR1B10P1-201ENST00000425765 942 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 Z85994.2-201ENST00000434327 452 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC073072.2-201ENST00000447425 348 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC093801.2-201ENST00000503966 1050 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 GAPDHP62-201ENST00000515313 990 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 OR8Q1P-201ENST00000526467 655 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 HSPE1P2-201ENST00000554777 306 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AL162233.1-201ENST00000620014 944 ntBASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.66□□□□□ -1.5
ZNF549Q6P9A3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms