Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 AL356968.2-201ENST00000412769 1257 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK3Q00526 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.61□□□□□ -1.51
CDK3Q00526 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK3Q00526 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK3Q00526 MTND6P5-201ENST00000448266 512 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK3Q00526 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK3Q00526 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDK3Q00526 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 NRBF2P4-201ENST00000520874 850 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CDK3Q00526 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK3Q00526 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK3Q00526 RBM22P12-201ENST00000567098 1255 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 MIR1273E-201ENST00000581165 102 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 NANOGP3-201ENST00000605855 286 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AL133481.2-203ENST00000607558 139 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AC008833.1-201ENST00000611633 691 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 MIR6886-201ENST00000619864 61 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 AC021422.1-201ENST00000621212 473 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK3Q00526 AL121839.2-201ENST00000565058 6943 ntBASIC5.61□□□□□ -1.51
CDK3Q00526 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CDK3Q00526 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK3Q00526 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 MTCO1P11-201ENST00000429111 1528 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 GAPDHP42-201ENST00000406848 981 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 RPS26P38-201ENST00000414476 348 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 AC017078.1-201ENST00000416146 368 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 AL133173.1-201ENST00000423458 397 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 MTCO1P57-201ENST00000432182 261 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 LDHBP2-201ENST00000456969 1005 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 NPM1P21-201ENST00000513394 762 ntBASIC5.6□□□□□ -1.51
CDK3Q00526 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.6□□□□□ -1.51
CDK3Q00526 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK3Q00526 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDK3Q00526 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK3Q00526 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK3Q00526 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CDK3Q00526 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 AP002512.4-202ENST00000641599 4530 ntBASIC5.59□□□□□ -1.51
CDK3Q00526 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CDK3Q00526 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDK3Q00526 RN7SKP124-201ENST00000364730 341 ntBASIC5.59□□□□□ -1.51
CDK3Q00526 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms