Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH11P55287 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 AL356806.1-201ENST00000422524 916 ntBASIC5.3□□□□□ -1.56
CDH11P55287 SETP10-201ENST00000424368 814 ntBASIC5.3□□□□□ -1.56
CDH11P55287 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
CDH11P55287 ZFAND6P1-201ENST00000434138 605 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 FTLP8-201ENST00000446770 267 ntBASIC5.3□□□□□ -1.56
CDH11P55287 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 OR5H7P-201ENST00000514084 930 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC117525.1-201ENST00000515228 503 ntBASIC5.3□□□□□ -1.56
CDH11P55287 MIR2117-201ENST00000516780 80 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 TMF1P1-201ENST00000576058 373 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 AC005014.3-201ENST00000605985 190 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 AL645933.2-201ENST00000606743 1207 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.3□□□□□ -1.56
CDH11P55287 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.3□□□□□ -1.56
CDH11P55287 AC015712.7-201ENST00000615211 635 ntBASIC5.3□□□□□ -1.56
CDH11P55287 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH11P55287 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH11P55287 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH11P55287 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AL078595.2-201ENST00000605309 1780 ntBASIC5.29□□□□□ -1.56
CDH11P55287 AC109446.4-201ENST00000623235 2755 ntBASIC5.29□□□□□ -1.56
CDH11P55287 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 FBXL21-201ENST00000297158 1305 ntBASIC5.29□□□□□ -1.56
CDH11P55287 AC005261.2-201ENST00000593427 4258 ntBASIC5.29□□□□□ -1.56
CDH11P55287 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH11P55287 CDY11P-201ENST00000447168 1651 ntBASIC5.29□□□□□ -1.56
CDH11P55287 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CDH11P55287 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH11P55287 RNU6-386P-201ENST00000362650 107 ntBASIC5.29□□□□□ -1.56
CDH11P55287 RN7SKP185-201ENST00000362813 326 ntBASIC5.29□□□□□ -1.56
CDH11P55287 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDH11P55287 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH11P55287 AC096644.3-201ENST00000416788 338 ntBASIC5.29□□□□□ -1.56
CDH11P55287 AC009506.2-201ENST00000420635 840 ntBASIC5.29□□□□□ -1.56
CDH11P55287 AJ239321.1-201ENST00000424255 564 ntBASIC5.29□□□□□ -1.56
CDH11P55287 CR848007.2-201ENST00000424918 787 ntBASIC5.29□□□□□ -1.56
CDH11P55287 GAPDHP75-201ENST00000433910 943 ntBASIC5.29□□□□□ -1.56
CDH11P55287 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH11P55287 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 CST12P-201ENST00000457644 362 ntBASIC5.29□□□□□ -1.56
CDH11P55287 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AC090602.1-201ENST00000469695 252 ntBASIC5.29□□□□□ -1.56
CDH11P55287 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AC006539.1-201ENST00000481419 501 ntBASIC5.29□□□□□ -1.56
CDH11P55287 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.29□□□□□ -1.56
CDH11P55287 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 SNORA70.11-201ENST00000515987 138 ntBASIC5.29□□□□□ -1.56
CDH11P55287 SNORA70.13-201ENST00000516116 138 ntBASIC5.29□□□□□ -1.56
CDH11P55287 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 OR8K2P-201ENST00000524645 927 ntBASIC5.29□□□□□ -1.56
CDH11P55287 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.29□□□□□ -1.56
CDH11P55287 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDH11P55287 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.29□□□□□ -1.56
CDH11P55287 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.29□□□□□ -1.56
CDH11P55287 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms