Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.88□□□□□ -1.47
LIMK1P53667 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMK1P53667 Mico1.1-201ENST00000611698 204 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LIMK1P53667 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LIMK1P53667 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMK1P53667 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LIMK1P53667 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LIMK1P53667 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 RAB9AP5-201ENST00000437794 597 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 RPL21P133-201ENST00000443666 476 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 RAB9AP2-201ENST00000443911 597 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 RN7SL172P-201ENST00000460535 303 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 RPS17P15-201ENST00000475609 349 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 RPL7P39-201ENST00000481157 744 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 HIGD1AP14-201ENST00000507617 282 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.87□□□□□ -1.47
LIMK1P53667 CDC42P3-201ENST00000518493 633 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMK1P53667 AL049539.1-201ENST00000611964 459 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 AL121612.2-201ENST00000612261 482 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 AC020658.4-201ENST00000613987 684 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 AL122125.1-201ENST00000616999 600 ntBASIC5.87□□□□□ -1.47
LIMK1P53667 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.87□□□□□ -1.47
LIMK1P53667 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LIMK1P53667 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMK1P53667 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LIMK1P53667 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMK1P53667 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 AC105235.1-201ENST00000623208 1816 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMK1P53667 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 RNU4-23P-201ENST00000362839 140 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 RNU105B-201ENST00000364478 208 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 SNORA43.1-201ENST00000364863 140 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK1P53667 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 AL022237.1-201ENST00000446663 358 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMK1P53667 UBA52P7-201ENST00000486088 380 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMK1P53667 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 RNU6-615P-201ENST00000516065 106 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.86□□□□□ -1.47
LIMK1P53667 IGHV1-14-201ENST00000523391 241 ntBASIC5.86□□□□□ -1.47
LIMK1P53667 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMK1P53667 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms