Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.46□□□□□ -1.54
RORAP35398 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.46□□□□□ -1.54
RORAP35398 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 AL049872.1-201ENST00000556323 322 ntBASIC5.46□□□□□ -1.54
RORAP35398 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 MIR1273E-201ENST00000581165 102 ntBASIC5.46□□□□□ -1.54
RORAP35398 AC063977.5-201ENST00000601044 974 ntBASIC5.46□□□□□ -1.54
RORAP35398 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.46□□□□□ -1.54
RORAP35398 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 AL022394.1-201ENST00000606979 292 ntBASIC5.46□□□□□ -1.54
RORAP35398 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.46□□□□□ -1.54
RORAP35398 MIR6826-201ENST00000617808 98 ntBASIC5.46□□□□□ -1.54
RORAP35398 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.46□□□□□ -1.54
RORAP35398 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RORAP35398 AC011503.2-201ENST00000594230 1500 ntBASIC5.46□□□□□ -1.54
RORAP35398 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RORAP35398 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 RARSP1-201ENST00000542842 1418 ntBASIC5.46□□□□□ -1.54
RORAP35398 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RORAP35398 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
RORAP35398 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 AC005224.3-201ENST00000584683 2140 ntBASIC5.45□□□□□ -1.54
RORAP35398 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RORAP35398 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RORAP35398 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.45□□□□□ -1.54
RORAP35398 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.45□□□□□ -1.54
RORAP35398 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.45□□□□□ -1.54
RORAP35398 BX510359.3-201ENST00000422168 306 ntBASIC5.45□□□□□ -1.54
RORAP35398 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.45□□□□□ -1.54
RORAP35398 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.45□□□□□ -1.54
RORAP35398 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.45□□□□□ -1.54
RORAP35398 RPS3AP38-201ENST00000435889 763 ntBASIC5.45□□□□□ -1.54
RORAP35398 RN7SL570P-201ENST00000484405 292 ntBASIC5.45□□□□□ -1.54
RORAP35398 TOMM22P4-201ENST00000511318 336 ntBASIC5.45□□□□□ -1.54
RORAP35398 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.45□□□□□ -1.54
RORAP35398 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.45□□□□□ -1.54
RORAP35398 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.45□□□□□ -1.54
RORAP35398 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.45□□□□□ -1.54
RORAP35398 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
RORAP35398 AL163952.1-202ENST00000569625 600 ntBASIC5.45□□□□□ -1.54
RORAP35398 AC090286.3-201ENST00000573133 187 ntBASIC5.45□□□□□ -1.54
RORAP35398 MIR4489-201ENST00000578869 62 ntBASIC5.45□□□□□ -1.54
RORAP35398 OR8G7P-201ENST00000616658 848 ntBASIC5.45□□□□□ -1.54
RORAP35398 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.45□□□□□ -1.54
RORAP35398 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.45□□□□□ -1.54
RORAP35398 AC007683.2-201ENST00000624681 714 ntBASIC5.45□□□□□ -1.54
RORAP35398 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.45□□□□□ -1.54
RORAP35398 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.45□□□□□ -1.54
RORAP35398 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RORAP35398 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RORAP35398 MRE11P1-201ENST00000464884 2127 ntBASIC5.45□□□□□ -1.54
RORAP35398 AC004158.1-201ENST00000564508 4319 ntBASIC5.45□□□□□ -1.54
RORAP35398 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
RORAP35398 AC117409.1-201ENST00000470499 1310 ntBASIC5.45□□□□□ -1.54
RORAP35398 YES1P1-201ENST00000418510 1628 ntBASIC5.45□□□□□ -1.54
RORAP35398 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RORAP35398 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RORAP35398 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 SRRM1P3-201ENST00000426911 2678 ntBASIC5.44□□□□□ -1.54
RORAP35398 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RORAP35398 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RORAP35398 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RORAP35398 OR6E1P-201ENST00000414424 923 ntBASIC5.44□□□□□ -1.54
RORAP35398 MARK2P12-201ENST00000420129 585 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC113412.1-201ENST00000425840 504 ntBASIC5.44□□□□□ -1.54
RORAP35398 FMO7P-201ENST00000436045 768 ntBASIC5.44□□□□□ -1.54
RORAP35398 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.44□□□□□ -1.54
RORAP35398 MTND6P5-201ENST00000448266 512 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC004129.2-201ENST00000457229 287 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC074386.1-201ENST00000476560 767 ntBASIC5.44□□□□□ -1.54
RORAP35398 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.44□□□□□ -1.54
RORAP35398 AC073610.1-201ENST00000489971 396 ntBASIC5.44□□□□□ -1.54
RORAP35398 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.44□□□□□ -1.54
RORAP35398 RPS4XP14-201ENST00000493072 781 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.44□□□□□ -1.54
RORAP35398 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.44□□□□□ -1.54
RORAP35398 snoU109.5-201ENST00000516231 132 ntBASIC5.44□□□□□ -1.54
RORAP35398 IGKV2-18-201ENST00000522607 343 ntBASIC5.44□□□□□ -1.54
RORAP35398 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.44□□□□□ -1.54
RORAP35398 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.44□□□□□ -1.54
RORAP35398 AC090424.1-201ENST00000535243 736 ntBASIC5.44□□□□□ -1.54
RORAP35398 AC125612.1-201ENST00000547580 377 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms