Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.71□□□□□ -1.17
ERCC3P19447 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 AL442128.2-201ENST00000620246 1824 ntBASIC7.71□□□□□ -1.17
ERCC3P19447 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.71□□□□□ -1.17
ERCC3P19447 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.71□□□□□ -1.17
ERCC3P19447 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ERCC3P19447 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
ERCC3P19447 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 FAM133CP-201ENST00000332869 704 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 FUNDC2P3-201ENST00000334716 533 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ERCC3P19447 RNU6-543P-201ENST00000362576 108 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RNA5SP77-201ENST00000365394 120 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RNU1-55P-201ENST00000365510 158 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ERCC3P19447 MIR1302-8-201ENST00000408342 128 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RNA5SP115-201ENST00000411160 107 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 RANP6-201ENST00000413691 644 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AL773545.3-201ENST00000414297 706 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC090960.1-201ENST00000421072 306 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 AL365396.1-201ENST00000430854 671 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 RPL7P29-201ENST00000437151 728 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ERCC3P19447 ARAFP2-201ENST00000440565 559 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC007327.1-201ENST00000447461 264 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 CEACAMP5-201ENST00000448037 961 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC233982.1-201ENST00000451247 436 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RNU7-27P-201ENST00000459281 62 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RN7SL834P-201ENST00000461450 286 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.71□□□□□ -1.18
ERCC3P19447 RPS4XP23-201ENST00000487801 237 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 HPRT1P2-201ENST00000505250 544 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 OR52H2P-201ENST00000514607 902 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 FABP5P12-201ENST00000515543 389 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 AP003461.1-201ENST00000528866 78 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AP000662.1-201ENST00000530952 487 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 TOMM20P1-201ENST00000534518 427 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.71□□□□□ -1.18
ERCC3P19447 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 AL365223.1-201ENST00000574864 1297 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC245052.7-201ENST00000601161 359 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC125494.2-201ENST00000602431 657 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 RPL12P48-201ENST00000605620 304 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC010245.2-201ENST00000606908 1167 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AP000255.1-201ENST00000610276 676 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 VIS1.1-201ENST00000610517 203 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AL589743.6-201ENST00000611025 117 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AC007490.1-201ENST00000624321 703 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 AL512506.2-201ENST00000624472 458 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 MIR1322-201ENST00000638013 71 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.71□□□□□ -1.18
ERCC3P19447 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.71□□□□□ -1.18
ERCC3P19447 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 AC000367.1-201ENST00000452711 1766 ntBASIC7.71□□□□□ -1.18
ERCC3P19447 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ERCC3P19447 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
ERCC3P19447 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
ERCC3P19447 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.7□□□□□ -1.18
ERCC3P19447 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ERCC3P19447 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms