Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 AC137627.1-201ENST00000545761 289 ntBASIC6.55□□□□□ -1.36
TOP1P11387 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 AP000894.4-201ENST00000610185 483 ntBASIC6.55□□□□□ -1.36
TOP1P11387 RNA5SP439-201ENST00000617595 124 ntBASIC6.55□□□□□ -1.36
TOP1P11387 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 CASC19-248ENST00000641674 1356 ntBASIC6.55□□□□□ -1.36
TOP1P11387 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.54□□□□□ -1.36
TOP1P11387 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
TOP1P11387 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 RNU4-2-201ENST00000365668 141 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AL391361.1-201ENST00000405580 489 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC096921.1-201ENST00000411661 375 ntBASIC6.54□□□□□ -1.36
TOP1P11387 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 OR6D1P-201ENST00000436165 939 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AL596266.1-201ENST00000448132 400 ntBASIC6.54□□□□□ -1.36
TOP1P11387 RANP1-206ENST00000455094 651 ntBASIC6.54□□□□□ -1.36
TOP1P11387 RPL35AP19-201ENST00000469425 329 ntBASIC6.54□□□□□ -1.36
TOP1P11387 SNRPCP3-201ENST00000474888 476 ntBASIC6.54□□□□□ -1.36
TOP1P11387 RN7SL184P-201ENST00000488308 297 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.54□□□□□ -1.36
TOP1P11387 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TOP1P11387 AC111000.6-201ENST00000514471 709 ntBASIC6.54□□□□□ -1.36
TOP1P11387 RNU6-1334P-201ENST00000516032 105 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC021733.2-201ENST00000518830 497 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.54□□□□□ -1.36
TOP1P11387 AC007225.2-201ENST00000562529 256 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.54□□□□□ -1.36
TOP1P11387 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.54□□□□□ -1.36
TOP1P11387 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.54□□□□□ -1.36
TOP1P11387 AC012616.1-201ENST00000600294 197 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC010245.2-201ENST00000606908 1167 ntBASIC6.54□□□□□ -1.36
TOP1P11387 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.54□□□□□ -1.36
TOP1P11387 AC079395.2-201ENST00000610982 737 ntBASIC6.54□□□□□ -1.36
TOP1P11387 AC132068.1-201ENST00000623805 459 ntBASIC6.54□□□□□ -1.36
TOP1P11387 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.54□□□□□ -1.36
TOP1P11387 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TOP1P11387 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TOP1P11387 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TOP1P11387 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TOP1P11387 BCORP1-203ENST00000513194 5093 ntBASIC6.54□□□□□ -1.36
TOP1P11387 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.54□□□□□ -1.36
TOP1P11387 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP1P11387 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 AC011933.2-201ENST00000578539 2790 ntBASIC6.53□□□□□ -1.36
TOP1P11387 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.53□□□□□ -1.36
TOP1P11387 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP1P11387 RNA5SP326-201ENST00000363209 110 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC005042.1-201ENST00000393397 800 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AL009179.1-201ENST00000406085 265 ntBASIC6.53□□□□□ -1.36
TOP1P11387 TMEM183AP1-205ENST00000432739 290 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC099670.2-201ENST00000435130 321 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC242426.1-201ENST00000435270 960 ntBASIC6.53□□□□□ -1.36
TOP1P11387 NANOGP9-201ENST00000439890 892 ntBASIC6.53□□□□□ -1.36
TOP1P11387 EIF3LP3-201ENST00000495197 822 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC108693.1-201ENST00000496068 432 ntBASIC6.53□□□□□ -1.36
TOP1P11387 IGKV2-18-201ENST00000522607 343 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.53□□□□□ -1.36
TOP1P11387 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TOP1P11387 PMS2P3-207ENST00000529061 717 ntBASIC6.53□□□□□ -1.36
TOP1P11387 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP1P11387 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.53□□□□□ -1.36
TOP1P11387 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.53□□□□□ -1.36
TOP1P11387 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.53□□□□□ -1.36
TOP1P11387 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AC007204.2-201ENST00000615022 616 ntBASIC6.53□□□□□ -1.36
TOP1P11387 AL118522.2-201ENST00000616045 615 ntBASIC6.53□□□□□ -1.36
TOP1P11387 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.53□□□□□ -1.36
TOP1P11387 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TOP1P11387 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms