Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD4P09016 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD4P09016 BMS1P17-202ENST00000416720 316 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXD4P09016 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXD4P09016 USP24P1-201ENST00000433802 779 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 KRT8P51-201ENST00000438938 274 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD4P09016 AL022319.1-201ENST00000458183 1167 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD4P09016 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 RN7SL466P-201ENST00000497546 295 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 RNU6-751P-201ENST00000516382 101 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD4P09016 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD4P09016 LSM3P2-201ENST00000551246 273 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD4P09016 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 FO393422.1-201ENST00000603908 708 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AC104695.2-201ENST00000605056 775 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AC211433.2-201ENST00000608433 387 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 AC007683.2-201ENST00000624681 714 ntBASIC5.27□□□□□ -1.57
HOXD4P09016 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD4P09016 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD4P09016 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD4P09016 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
HOXD4P09016 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 AC120036.2-201ENST00000509729 1474 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC019205.1-201ENST00000421830 730 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 RFESDP1-201ENST00000422350 461 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 NPM1P18-201ENST00000434232 732 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC099670.2-201ENST00000435130 321 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AL627308.1-201ENST00000435693 821 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 MTND2P40-201ENST00000436718 841 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 CUBNP2-201ENST00000443534 1139 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC022215.1-201ENST00000481770 362 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC068993.1-201ENST00000546724 589 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC084033.1-201ENST00000550830 633 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 OOSP1P2-201ENST00000579644 351 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 MIR4505-201ENST00000582238 73 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXD4P09016 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 MIR6719-201ENST00000622428 87 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXD4P09016 AC087565.3-203ENST00000641018 837 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.26□□□□□ -1.57
HOXD4P09016 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXD4P09016 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXD4P09016 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 AC019072.1-201ENST00000604535 1551 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXD4P09016 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.25□□□□□ -1.57
HOXD4P09016 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
HOXD4P09016 AC114774.1-201ENST00000507410 1770 ntBASIC5.25□□□□□ -1.57
HOXD4P09016 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms