Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC073429.2-201ENST00000569694 1444 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 RPSAP73-201ENST00000614820 330 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 CASC19-222ENST00000641321 1173 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA1P02708 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC083837.1-201ENST00000565297 2994 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CHRNA1P02708 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHRNA1P02708 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHRNA1P02708 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 U3.2-201ENST00000362981 210 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 SNORA16A-201ENST00000384342 137 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 MIR551A-201ENST00000385042 96 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 METTL15P3-201ENST00000415522 1221 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC005033.1-201ENST00000428904 813 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 AURKAPS1-201ENST00000451805 1212 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 AL035090.1-201ENST00000454835 332 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA1P02708 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC026782.2-201ENST00000510845 636 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC139697.1-201ENST00000548429 745 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 HNRNPCP1-201ENST00000556181 766 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.11□□□□□ -1.43
CHRNA1P02708 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 AL139407.1-201ENST00000613826 1175 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHRNA1P02708 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 AL137058.3-201ENST00000624531 3099 ntBASIC6.11□□□□□ -1.43
CHRNA1P02708 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CHRNA1P02708 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHRNA1P02708 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CHRNA1P02708 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHRNA1P02708 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHRNA1P02708 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 AC005294.1-201ENST00000355509 281 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 RNA5SP507-201ENST00000363603 121 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 U8.4-201ENST00000363626 134 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 AC010740.1-201ENST00000417035 684 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 AC006455.6-201ENST00000426192 893 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 VN1R21P-201ENST00000426703 765 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 CRIP1P1-201ENST00000427567 185 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 BX679664.2-201ENST00000439282 283 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 FAR2P1-206ENST00000449736 709 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 SLC25A51P1-201ENST00000468432 871 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA1P02708 RPS7P6-201ENST00000485777 579 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 RPL15P21-201ENST00000495592 567 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 DHFRP1-201ENST00000579682 559 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.1□□□□□ -1.43
CHRNA1P02708 AC024940.4-201ENST00000605507 246 ntBASIC6.1□□□□□ -1.43
CHRNA1P02708 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA1P02708 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.1□□□□□ -1.43
CHRNA1P02708 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CHRNA1P02708 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHRNA1P02708 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.1□□□□□ -1.43
CHRNA1P02708 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CHRNA1P02708 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms