Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHOX2O60902 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 AL078595.2-201ENST00000605309 1780 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 GAPDHP24-201ENST00000328713 983 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AL132875.1-201ENST00000403623 949 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.53□□□□□ -1.52
SHOX2O60902 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.53□□□□□ -1.52
SHOX2O60902 RPL36AP10-201ENST00000421785 322 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 RPEP4-201ENST00000437636 602 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 NPM1P33-201ENST00000438918 872 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 RN7SL269P-201ENST00000467795 305 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC073610.1-201ENST00000489971 396 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 PFN1P8-201ENST00000497012 543 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC117500.1-201ENST00000497352 755 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC139365.2-201ENST00000517972 253 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 OR11H3P-201ENST00000554547 982 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 NDUFA5P11-201ENST00000567995 343 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.53□□□□□ -1.52
SHOX2O60902 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 AC135068.5-201ENST00000624197 983 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 MIR1910-201ENST00000636955 80 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.53□□□□□ -1.52
SHOX2O60902 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SHOX2O60902 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.53□□□□□ -1.52
SHOX2O60902 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SHOX2O60902 AL137141.1-201ENST00000624622 4836 ntBASIC5.53□□□□□ -1.52
SHOX2O60902 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SHOX2O60902 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.52□□□□□ -1.53
SHOX2O60902 RNA5SP110-201ENST00000362638 115 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHOX2O60902 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHOX2O60902 OR6C64P-201ENST00000419708 825 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC245291.3-201ENST00000443400 292 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHOX2O60902 AL031584.1-201ENST00000447169 754 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AL445466.1-201ENST00000448432 357 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.52□□□□□ -1.53
SHOX2O60902 RN7SL591P-201ENST00000496150 292 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC011411.1-201ENST00000509592 876 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.52□□□□□ -1.53
SHOX2O60902 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.52□□□□□ -1.53
SHOX2O60902 AC036111.2-201ENST00000533247 901 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHOX2O60902 AL390334.1-201ENST00000556395 450 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.52□□□□□ -1.53
SHOX2O60902 RN7SL66P-201ENST00000582099 264 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.52□□□□□ -1.53
SHOX2O60902 AP005136.2-201ENST00000583253 1049 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.52□□□□□ -1.53
SHOX2O60902 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.52□□□□□ -1.53
SHOX2O60902 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.52□□□□□ -1.53
SHOX2O60902 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms