Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMX1BO60663 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMX1BO60663 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LMX1BO60663 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 RNU6-925P-201ENST00000384629 104 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 MIR620-201ENST00000385232 95 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 RN7SKP17-201ENST00000411242 351 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 AC007064.3-201ENST00000422608 359 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 MAPRE1P3-201ENST00000435438 796 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 AL645638.1-201ENST00000440519 361 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 HMGN1P36-201ENST00000446623 298 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC009963.4-201ENST00000448535 339 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 FRG2FP-204ENST00000453982 852 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 FCF1P6-201ENST00000456841 595 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 RPSAP37-201ENST00000470913 821 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 AC108729.1-201ENST00000487812 947 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 RN7SL629P-201ENST00000489622 285 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC008629.2-201ENST00000503783 483 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 SCARNA18.1-201ENST00000516330 83 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 MIR2117-201ENST00000516780 80 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 AC007346.2-201ENST00000564816 892 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 OR1AB1P-201ENST00000585564 761 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 AC013244.1-201ENST00000604279 193 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC108673.3-201ENST00000609183 335 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 AC016957.2-201ENST00000616998 848 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 AC097520.1-201ENST00000624435 385 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 AC015689.2-201ENST00000528172 1738 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 RBMY1HP-201ENST00000382759 1389 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 BX284613.1-201ENST00000452221 1641 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMX1BO60663 RN7SKP128-201ENST00000364270 303 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMX1BO60663 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMX1BO60663 RN7SKP286-201ENST00000410894 299 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AL035660.1-201ENST00000422041 222 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.12□□□□□ -1.59
LMX1BO60663 AC099677.3-201ENST00000427081 395 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.12□□□□□ -1.59
LMX1BO60663 MTND1P26-201ENST00000440488 538 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 RPS7P3-201ENST00000443360 580 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 RPL36AP39-201ENST00000445859 318 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC005077.1-201ENST00000449226 375 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AP006222.1-205ENST00000450734 457 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC004129.2-201ENST00000457229 287 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC002075.1-201ENST00000457396 676 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 AC023141.9-201ENST00000458734 412 ntBASIC5.12□□□□□ -1.59
LMX1BO60663 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMX1BO60663 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms