Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL591379.1-207ENST00000635982 261 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.35□□□□□ -1.55
SSX4O60224 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 AC073869.7-201ENST00000640874 297 ntBASIC5.35□□□□□ -1.55
SSX4O60224 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX4O60224 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 AC024587.1-201ENST00000505925 2157 ntBASIC5.35□□□□□ -1.55
SSX4O60224 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
SSX4O60224 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX4O60224 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 AL354854.1-201ENST00000455940 1363 ntBASIC5.34□□□□□ -1.55
SSX4O60224 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX4O60224 RNA5SP346-201ENST00000363541 121 ntBASIC5.34□□□□□ -1.55
SSX4O60224 RNA5SP187-201ENST00000384400 119 ntBASIC5.34□□□□□ -1.55
SSX4O60224 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SSX4O60224 SNORA40.4-201ENST00000390971 128 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.34□□□□□ -1.55
SSX4O60224 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
SSX4O60224 AP002345.1-201ENST00000456493 928 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 EIF2S2P4-201ENST00000461070 984 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC104629.2-201ENST00000468627 598 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC108157.1-201ENST00000510511 539 ntBASIC5.34□□□□□ -1.55
SSX4O60224 HMGB1P47-201ENST00000511281 589 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX4O60224 RN7SKP238-201ENST00000516483 249 ntBASIC5.34□□□□□ -1.55
SSX4O60224 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
SSX4O60224 NANOGNBP2-201ENST00000544753 553 ntBASIC5.34□□□□□ -1.55
SSX4O60224 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 LINC00557-201ENST00000563184 1279 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 NPIPB1P-202ENST00000588786 828 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC020916.2-201ENST00000591242 360 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX4O60224 OR4H6P-202ENST00000603819 340 ntBASIC5.34□□□□□ -1.55
SSX4O60224 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX4O60224 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX4O60224 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SSX4O60224 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SSX4O60224 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX4O60224 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SSX4O60224 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX4O60224 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SSX4O60224 AC020633.1-201ENST00000468439 2247 ntBASIC5.33□□□□□ -1.56
SSX4O60224 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX4O60224 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX4O60224 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 RN7SKP69-201ENST00000365390 305 ntBASIC5.33□□□□□ -1.56
SSX4O60224 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 AL672167.2-201ENST00000377164 879 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL445213.1-201ENST00000412589 747 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 GLUD1P9-201ENST00000420997 1173 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX4O60224 AC138761.5-201ENST00000433967 325 ntBASIC5.33□□□□□ -1.56
SSX4O60224 NPM1P18-201ENST00000434232 732 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL590762.3-201ENST00000436372 640 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL353662.1-201ENST00000439099 327 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX4O60224 CYCSP51-201ENST00000443545 318 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX4O60224 MTND2P25-201ENST00000449028 610 ntBASIC5.33□□□□□ -1.56
SSX4O60224 HLA-DPA3-207ENST00000454398 229 ntBASIC5.33□□□□□ -1.56
SSX4O60224 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX4O60224 AC090543.1-201ENST00000492168 485 ntBASIC5.33□□□□□ -1.56
SSX4O60224 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX4O60224 AC025458.1-201ENST00000506046 166 ntBASIC5.33□□□□□ -1.56
SSX4O60224 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms