Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA3F8WFD2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 RNA5SP394-201ENST00000364216 119 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AL034379.1-201ENST00000423216 253 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC127526.2-201ENST00000426436 775 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 DEFA9P-201ENST00000433042 285 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 HMGB3P24-201ENST00000433260 622 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AL392003.1-201ENST00000434394 243 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 RPS3AP38-201ENST00000435889 763 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC002504.1-201ENST00000438281 691 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC023141.8-201ENST00000442554 208 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 LRRC37A14P-201ENST00000452297 462 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 MTND3P4-201ENST00000453537 303 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 SUMO2P4-201ENST00000504193 276 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AL121839.1-201ENST00000556233 1185 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 MIR4505-201ENST00000582238 73 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC007448.1-201ENST00000582714 234 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AC067838.1-201ENST00000606064 577 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 FAM72A-208ENST00000607379 1139 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 BX323046.1-201ENST00000610145 535 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 MIR6826-201ENST00000617808 98 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AL691477.1-201ENST00000624398 162 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 AL034546.1-201ENST00000623740 3693 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 NAMPTP1-201ENST00000440465 2514 ntBASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
NPIPA3F8WFD2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 CIR1P2-201ENST00000514821 1342 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC130304.1-201ENST00000622942 2385 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC125336.1-201ENST00000508893 2827 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 RNU6-618P-201ENST00000363518 112 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL353625.1-202ENST00000366273 571 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL139039.2-201ENST00000407436 479 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 GTF3AP1-201ENST00000416942 1004 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 OSTCP1-201ENST00000455507 450 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC110749.1-201ENST00000462007 357 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 RNA5SP362-201ENST00000516048 118 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 SNORA43.3-201ENST00000517240 103 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 OR4A6P-201ENST00000534364 970 ntBASIC5.27□□□□□ -1.57
NPIPA3F8WFD2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms