Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MIR1203-201ENST00000408812 85 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC017078.1-201ENST00000416146 368 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC017019.1-201ENST00000426129 261 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 EEF1B2P3-201ENST00000447718 678 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 NPM1P19-201ENST00000450070 712 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 HMGN1P9-201ENST00000515212 298 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 SCARNA20.4-201ENST00000516969 131 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 MIR4660-201ENST00000583549 74 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 OR51C1P-201ENST00000608504 942 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC025574.2-201ENST00000615621 514 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 FRG1EP-201ENST00000634469 770 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 OR8G3P-202ENST00000641572 1255 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AC020633.1-201ENST00000468439 2247 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC42Q96M95 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC42Q96M95 AL162456.1-201ENST00000634535 2006 ntBASIC5.91□□□□□ -1.46
CCDC42Q96M95 MRE11P1-201ENST00000464884 2127 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC42Q96M95 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC42Q96M95 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AL034549.2-201ENST00000618285 3373 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC42Q96M95 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC42Q96M95 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC42Q96M95 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 OR1L6-202ENST00000373684 1044 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 SNORA48.4-201ENST00000391089 134 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 AL035660.1-201ENST00000422041 222 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 RPL19P16-201ENST00000433839 588 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 OR52E3P-201ENST00000452083 936 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 CDC42P3-201ENST00000518493 633 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC130364.2-201ENST00000528639 604 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 HMGB1P42-201ENST00000532126 553 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AL359219.2-201ENST00000555184 348 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 LINC00556-201ENST00000569603 412 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 AC097641.3-201ENST00000613523 464 ntBASIC5.9□□□□□ -1.46
CCDC42Q96M95 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
CCDC42Q96M95 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC42Q96M95 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC42Q96M95 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC42Q96M95 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC42Q96M95 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC42Q96M95 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC42Q96M95 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC42Q96M95 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
CCDC42Q96M95 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 RN7SKP171-201ENST00000364417 303 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 OR7E101P-201ENST00000400428 513 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 MIR1275-201ENST00000408770 80 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 RMRPP5-201ENST00000411156 267 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC42Q96M95 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC090804.1-201ENST00000448870 490 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC068491.1-201ENST00000449539 1241 ntBASIC5.89□□□□□ -1.47
CCDC42Q96M95 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC42Q96M95 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms