Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC083899.1-201ENST00000454465 3819 ntBASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ECHDC3Q96DC8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 MT-RNR2-201ENST00000387347 1559 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 RNU4-2-201ENST00000365668 141 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 MIR551A-201ENST00000385042 96 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 U3.23-201ENST00000391132 200 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC079355.1-201ENST00000421770 223 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 CYCSP51-201ENST00000443545 318 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 RANP1-206ENST00000455094 651 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 EIF1P7-201ENST00000487533 337 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 RN7SL753P-201ENST00000581238 290 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC010245.2-201ENST00000606908 1167 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AC132068.1-201ENST00000623805 459 ntBASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ECHDC3Q96DC8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.59□□□□□ -1.52
ECHDC3Q96DC8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC125336.1-201ENST00000508893 2827 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC092070.2-203ENST00000598377 3644 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RN7SKP6-201ENST00000364795 319 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 OR3A2-201ENST00000408891 1076 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC092106.1-201ENST00000444291 373 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RPS23P9-201ENST00000448848 438 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RPL35AP19-201ENST00000469425 329 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RN7SL583P-201ENST00000475692 287 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC093815.1-201ENST00000508637 280 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 LDHBP3-201ENST00000514909 822 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 IGKV2-19-201ENST00000518132 283 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC122688.1-201ENST00000541494 223 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 MIR3176-201ENST00000582210 90 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AP001357.1-201ENST00000586304 1053 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC015712.7-201ENST00000615211 635 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 MIR6886-201ENST00000619864 61 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AL355480.1-201ENST00000629041 99 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 AC006206.1-201ENST00000544842 3387 ntBASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
ECHDC3Q96DC8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AC068870.1-201ENST00000563737 2455 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AP002512.4-202ENST00000641599 4530 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 AL137141.1-201ENST00000624622 4836 ntBASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.57□□□□□ -1.52
ECHDC3Q96DC8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms