Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL445928.1-201ENST00000435545 222 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 MTCYBP29-201ENST00000436327 1006 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 LINC00328-2P-201ENST00000436585 219 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC099670.1-201ENST00000455141 783 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 OR7E157P-201ENST00000494376 911 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 OR7E99P-201ENST00000505750 922 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC108157.1-201ENST00000510511 539 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ACTR6P1-201ENST00000514311 1104 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 NPIPB14P-203ENST00000532298 987 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC010503.3-201ENST00000594355 540 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 KATNBL1P1-201ENST00000605192 748 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC005021.1-201ENST00000608730 355 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AL021918.2-201ENST00000613415 194 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC138965.3-201ENST00000623875 498 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 MT-RNR2-201ENST00000387347 1559 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS33AQ96AX1 AC132825.1-201ENST00000463573 2247 ntBASIC5.58□□□□□ -1.52
VPS33AQ96AX1 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 UGT2B26P-201ENST00000508672 1613 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RNA5SP187-201ENST00000384400 119 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 BTF3P9-201ENST00000418784 283 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC130360.1-201ENST00000425489 1117 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RPSAP65-201ENST00000429660 595 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 NPM1P18-201ENST00000434232 732 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RPL5P25-201ENST00000441148 775 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RPS23P9-201ENST00000448848 438 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RN7SL197P-201ENST00000466981 299 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC018639.1-201ENST00000492994 442 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 HMGN1P17-201ENST00000513734 295 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 FTH1P11-201ENST00000517577 551 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC130365.2-201ENST00000525882 1201 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC087888.1-201ENST00000550884 1254 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 MRPS21P8-201ENST00000569196 235 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 MIR4675-201ENST00000577898 77 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RN7SL66P-201ENST00000582099 264 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 MIR4701-201ENST00000583094 63 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 MIMT1-201ENST00000597105 1050 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 WBP1LP12-201ENST00000604449 331 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 HIRAP1-201ENST00000605318 787 ntBASIC5.57□□□□□ -1.52
VPS33AQ96AX1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS33AQ96AX1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms