Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCNA1P78396 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CCNA1P78396 SNORA70H-201ENST00000383910 135 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 SNORA70J-201ENST00000384182 135 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 MIR765-201ENST00000390226 114 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 OR6D1P-201ENST00000436165 939 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 SUMO2P1-206ENST00000445436 284 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 OSTCP1-201ENST00000455507 450 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 RPL7AP6-201ENST00000477943 801 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 RNA5SP116-201ENST00000516132 98 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.44□□□□□ -1.38
CCNA1P78396 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.44□□□□□ -1.38
CCNA1P78396 AC078878.1-201ENST00000539832 958 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 AC126177.5-201ENST00000549599 178 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.44□□□□□ -1.38
CCNA1P78396 AC024940.4-201ENST00000605507 246 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 AC126915.2-201ENST00000610957 190 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCNA1P78396 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.44□□□□□ -1.38
CCNA1P78396 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CCNA1P78396 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.44□□□□□ -1.38
CCNA1P78396 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CCNA1P78396 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.44□□□□□ -1.38
CCNA1P78396 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 RNA5SP514-201ENST00000363717 111 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 RNA5SP335-201ENST00000363817 110 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.43□□□□□ -1.38
CCNA1P78396 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.43□□□□□ -1.38
CCNA1P78396 AC005033.1-201ENST00000428904 813 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 RPL12P3-201ENST00000440080 396 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AC245047.2-201ENST00000441060 530 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 RPS26P41-201ENST00000450370 284 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.43□□□□□ -1.38
CCNA1P78396 DUTP1-201ENST00000493631 470 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.43□□□□□ -1.38
CCNA1P78396 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.43□□□□□ -1.38
CCNA1P78396 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.43□□□□□ -1.38
CCNA1P78396 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCNA1P78396 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.43□□□□□ -1.38
CCNA1P78396 AGGF1P7-201ENST00000562369 913 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AL163952.1-202ENST00000569625 600 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.43□□□□□ -1.38
CCNA1P78396 NANOGP3-201ENST00000605855 286 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 AL445222.1-201ENST00000607259 628 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.43□□□□□ -1.38
CCNA1P78396 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 AL117378.2-201ENST00000622916 1337 ntBASIC6.43□□□□□ -1.38
CCNA1P78396 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCNA1P78396 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.43□□□□□ -1.38
CCNA1P78396 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 CDY11P-201ENST00000447168 1651 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCNA1P78396 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.42□□□□□ -1.38
CCNA1P78396 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.42□□□□□ -1.38
CCNA1P78396 U8.4-201ENST00000363626 134 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCNA1P78396 RNU4-64P-201ENST00000410795 131 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 MTND4LP17-201ENST00000414607 293 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 AC013410.1-201ENST00000436223 1232 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 AC105399.1-202ENST00000447303 205 ntBASIC6.42□□□□□ -1.38
CCNA1P78396 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.42□□□□□ -1.38
CCNA1P78396 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms