Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 RPS27AP6-201ENST00000427962 448 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AP000281.1-201ENST00000444036 316 ntBASIC5.27□□□□□ -1.57
LIM2P55344 VN1R96P-201ENST00000446052 858 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AL451063.1-201ENST00000450164 1133 ntBASIC5.27□□□□□ -1.57
LIM2P55344 RPS27AP2-201ENST00000457576 465 ntBASIC5.27□□□□□ -1.57
LIM2P55344 RN7SL273P-201ENST00000481561 299 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.27□□□□□ -1.57
LIM2P55344 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.27□□□□□ -1.57
LIM2P55344 AC074087.1-201ENST00000512059 724 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.27□□□□□ -1.57
LIM2P55344 TMEM97P2-201ENST00000517841 403 ntBASIC5.27□□□□□ -1.57
LIM2P55344 NRBF2P4-201ENST00000520874 850 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.27□□□□□ -1.57
LIM2P55344 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.27□□□□□ -1.57
LIM2P55344 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.27□□□□□ -1.57
LIM2P55344 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 RBM22P12-201ENST00000567098 1255 ntBASIC5.27□□□□□ -1.57
LIM2P55344 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.27□□□□□ -1.57
LIM2P55344 H3F3BP2-201ENST00000583907 357 ntBASIC5.27□□□□□ -1.57
LIM2P55344 PPATP2-201ENST00000605635 508 ntBASIC5.27□□□□□ -1.57
LIM2P55344 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 SNORA17.5-201ENST00000630429 132 ntBASIC5.27□□□□□ -1.57
LIM2P55344 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIM2P55344 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIM2P55344 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIM2P55344 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.27□□□□□ -1.57
LIM2P55344 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIM2P55344 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.27□□□□□ -1.57
LIM2P55344 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.26□□□□□ -1.57
LIM2P55344 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.26□□□□□ -1.57
LIM2P55344 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.26□□□□□ -1.57
LIM2P55344 AC007161.1-204ENST00000423039 460 ntBASIC5.26□□□□□ -1.57
LIM2P55344 TNPO1P1-201ENST00000423641 1138 ntBASIC5.26□□□□□ -1.57
LIM2P55344 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 AL389925.1-201ENST00000432257 728 ntBASIC5.26□□□□□ -1.57
LIM2P55344 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.26□□□□□ -1.57
LIM2P55344 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.26□□□□□ -1.57
LIM2P55344 OR5AM1P-201ENST00000532136 1032 ntBASIC5.26□□□□□ -1.57
LIM2P55344 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.26□□□□□ -1.57
LIM2P55344 FO393422.1-201ENST00000603908 708 ntBASIC5.26□□□□□ -1.57
LIM2P55344 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
LIM2P55344 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LIM2P55344 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.26□□□□□ -1.57
LIM2P55344 AC144833.1-201ENST00000567953 4089 ntBASIC5.26□□□□□ -1.57
LIM2P55344 AC016745.2-201ENST00000608834 3443 ntBASIC5.26□□□□□ -1.57
LIM2P55344 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LIM2P55344 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 AP000432.2-201ENST00000624164 2048 ntBASIC5.25□□□□□ -1.57
LIM2P55344 KARSP1-201ENST00000451871 1752 ntBASIC5.25□□□□□ -1.57
LIM2P55344 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LIM2P55344 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 MIR551A-201ENST00000385042 96 ntBASIC5.25□□□□□ -1.57
LIM2P55344 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LIM2P55344 RNA5SP178-201ENST00000410380 128 ntBASIC5.25□□□□□ -1.57
LIM2P55344 AC009506.2-201ENST00000420635 840 ntBASIC5.25□□□□□ -1.57
LIM2P55344 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LIM2P55344 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 OR6D1P-201ENST00000436165 939 ntBASIC5.25□□□□□ -1.57
LIM2P55344 LINC02210-201ENST00000444561 288 ntBASIC5.25□□□□□ -1.57
LIM2P55344 AC073909.1-201ENST00000447112 999 ntBASIC5.25□□□□□ -1.57
LIM2P55344 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 SETP20-201ENST00000457046 852 ntBASIC5.25□□□□□ -1.57
LIM2P55344 AC108751.3-201ENST00000461814 1020 ntBASIC5.25□□□□□ -1.57
LIM2P55344 RN7SL583P-201ENST00000475692 287 ntBASIC5.25□□□□□ -1.57
LIM2P55344 RPL7P51-201ENST00000490532 749 ntBASIC5.25□□□□□ -1.57
LIM2P55344 RPSAP51-201ENST00000497462 645 ntBASIC5.25□□□□□ -1.57
LIM2P55344 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.25□□□□□ -1.57
LIM2P55344 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.25□□□□□ -1.57
LIM2P55344 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.25□□□□□ -1.57
LIM2P55344 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms