Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC100767.2-201ENST00000604840 693 ntBASIC4.31□□□□□ -1.72
HLA-DMBP28068 MIR6793-201ENST00000612376 63 ntBASIC4.31□□□□□ -1.72
HLA-DMBP28068 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DMBP28068 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 AC027088.4-201ENST00000611559 1947 ntBASIC4.31□□□□□ -1.72
HLA-DMBP28068 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DMBP28068 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL121886.1-201ENST00000358609 435 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 RNA5SP500-201ENST00000364486 119 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC092642.1-201ENST00000392417 425 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC019205.1-201ENST00000421830 730 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 OR10T1P-201ENST00000424327 947 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 BX323845.3-201ENST00000428215 527 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 RPS23P2-201ENST00000463671 415 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC104109.1-201ENST00000498563 436 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC105420.1-201ENST00000504389 582 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 RNA5SP438-201ENST00000516561 112 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 IGLVIV-64-201ENST00000518581 301 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 PCNAP4-201ENST00000532690 730 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC005618.4-201ENST00000625053 554 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AC144833.1-201ENST00000567953 4089 ntBASIC4.3□□□□□ -1.72
HLA-DMBP28068 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DMBP28068 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DMBP28068 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMBP28068 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMBP28068 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMBP28068 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC091305.2-201ENST00000624049 1576 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 RN7SKP145-201ENST00000363291 303 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 MIR323B-201ENST00000385269 82 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 U3.28-201ENST00000391249 210 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 NACAP7-201ENST00000407371 609 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 RPS6P23-201ENST00000413224 722 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 NIFKP3-201ENST00000417799 865 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 HMGN2P27-201ENST00000427352 270 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC023271.1-201ENST00000445936 1090 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 GAPDHP14-201ENST00000450472 937 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 SETP20-201ENST00000457046 852 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 RPL7P51-201ENST00000490532 749 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 RPS26P24-201ENST00000497656 331 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 GLUD1P3-202ENST00000508551 200 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 GAPDHP71-201ENST00000511530 1003 ntBASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DMBP28068 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DMBP28068 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms