Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.6□□□□□ -1.35
POLR2AP24928 AL391834.1-201ENST00000609609 560 ntBASIC6.6□□□□□ -1.35
POLR2AP24928 AC016597.2-201ENST00000613256 341 ntBASIC6.6□□□□□ -1.35
POLR2AP24928 MIR6758-201ENST00000620653 63 ntBASIC6.6□□□□□ -1.35
POLR2AP24928 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
POLR2AP24928 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
POLR2AP24928 AC131971.1-201ENST00000332881 1482 ntBASIC6.6□□□□□ -1.35
POLR2AP24928 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
POLR2AP24928 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
POLR2AP24928 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.6□□□□□ -1.35
POLR2AP24928 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.59□□□□□ -1.35
POLR2AP24928 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
POLR2AP24928 AL034546.1-201ENST00000623740 3693 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
POLR2AP24928 RNA5SP505-201ENST00000364748 108 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.59□□□□□ -1.35
POLR2AP24928 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
POLR2AP24928 MIR551A-201ENST00000385042 96 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 AC104837.2-201ENST00000427236 424 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 AL645638.1-201ENST00000440519 361 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 AC147055.1-201ENST00000509261 750 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.59□□□□□ -1.35
POLR2AP24928 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.59□□□□□ -1.35
POLR2AP24928 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 OR4G3P-201ENST00000633500 913 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
POLR2AP24928 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
POLR2AP24928 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
POLR2AP24928 SPATA31C1-201ENST00000420021 3895 ntBASIC6.59□□□□□ -1.35
POLR2AP24928 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
POLR2AP24928 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
POLR2AP24928 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
POLR2AP24928 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 VDAC1P6-201ENST00000430062 855 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 ZFAND6P1-201ENST00000434138 605 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC074367.1-201ENST00000438685 1125 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC079922.1-201ENST00000443291 359 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC005351.1-201ENST00000511152 786 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 MTATP6P9-201ENST00000515039 680 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC135279.1-201ENST00000543493 504 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.58□□□□□ -1.36
POLR2AP24928 MIR4697-201ENST00000582977 78 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.58□□□□□ -1.36
POLR2AP24928 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
POLR2AP24928 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
POLR2AP24928 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.58□□□□□ -1.36
POLR2AP24928 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
POLR2AP24928 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 AL772161.1-201ENST00000439130 476 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AL603882.1-201ENST00000463059 681 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 EIF1P7-201ENST00000487533 337 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 DUTP1-201ENST00000493631 470 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 TRAV31-201ENST00000502780 342 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
POLR2AP24928 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.58□□□□□ -1.36
POLR2AP24928 AC095055.1-201ENST00000603472 1113 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AL158050.2-201ENST00000605336 568 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC013244.3-201ENST00000605614 388 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC242628.1-201ENST00000606810 391 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AL049777.1-201ENST00000622740 518 ntBASIC6.58□□□□□ -1.36
POLR2AP24928 AC010608.3-201ENST00000625048 527 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms