Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 RN7SL570P-201ENST00000484405 292 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 AC009120.1-201ENST00000493458 473 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 RNU6-615P-201ENST00000516065 106 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 HMGB1P42-201ENST00000532126 553 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.63□□□□□ -1.51
XRCC1P18887 AL121594.2-201ENST00000541658 472 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.63□□□□□ -1.51
XRCC1P18887 DPPA2P4-201ENST00000563717 878 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC016839.1-201ENST00000578162 867 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC241377.1-201ENST00000619797 406 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 AC123912.3-201ENST00000600907 1367 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.63□□□□□ -1.51
XRCC1P18887 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.63□□□□□ -1.51
XRCC1P18887 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
XRCC1P18887 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 AL034546.1-201ENST00000623740 3693 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 TRAV35-201ENST00000390462 330 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 RPL11P3-201ENST00000395256 523 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AL357752.1-201ENST00000412817 349 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.62□□□□□ -1.51
XRCC1P18887 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 Z84478.1-201ENST00000438230 1219 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC074087.1-201ENST00000512059 724 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 SNORA43.3-201ENST00000517240 103 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AC139365.2-201ENST00000517972 253 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC027544.3-201ENST00000535082 757 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC096996.1-201ENST00000563813 325 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 MIR4505-201ENST00000582238 73 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 FAM72A-208ENST00000607379 1139 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 MIR6133-201ENST00000617057 108 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.62□□□□□ -1.51
XRCC1P18887 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
XRCC1P18887 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.62□□□□□ -1.51
XRCC1P18887 TET1P1-201ENST00000426627 2301 ntBASIC5.62□□□□□ -1.51
XRCC1P18887 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 FBXL21-201ENST00000297158 1305 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 AL159987.1-201ENST00000347911 293 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 MIR143-201ENST00000385300 106 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 AC012078.1-201ENST00000405035 1646 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 AL662874.1-201ENST00000426065 230 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC005297.1-201ENST00000444765 862 ntBASIC5.61□□□□□ -1.51
XRCC1P18887 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.61□□□□□ -1.51
XRCC1P18887 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.61□□□□□ -1.51
XRCC1P18887 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.61□□□□□ -1.51
XRCC1P18887 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
XRCC1P18887 AC109481.1-201ENST00000509173 282 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms