Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPL6P29-201ENST00000414863 865 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 AC092066.1-201ENST00000425131 317 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 AC073335.1-201ENST00000427776 363 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL022331.1-201ENST00000429025 477 ntBASIC6.26□□□□□ -1.41
ATF4P18848 HSPD1P12-201ENST00000429127 1069 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 BMS1P19-201ENST00000433925 393 ntBASIC6.26□□□□□ -1.41
ATF4P18848 PHB2P1-201ENST00000434943 890 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL590399.4-201ENST00000436561 601 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL831737.1-201ENST00000441288 271 ntBASIC6.26□□□□□ -1.41
ATF4P18848 BMI1P1-201ENST00000445879 941 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 AL451081.2-201ENST00000448115 933 ntBASIC6.26□□□□□ -1.41
ATF4P18848 PPIAP28-201ENST00000458378 485 ntBASIC6.26□□□□□ -1.41
ATF4P18848 RNA5SP269-201ENST00000459032 137 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC009022.1-201ENST00000472115 496 ntBASIC6.26□□□□□ -1.41
ATF4P18848 RN7SL107P-201ENST00000478127 283 ntBASIC6.26□□□□□ -1.41
ATF4P18848 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 GGTA1P-204ENST00000488429 1104 ntBASIC6.26□□□□□ -1.41
ATF4P18848 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 OR4G11P-201ENST00000492842 939 ntBASIC6.26□□□□□ -1.41
ATF4P18848 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 AC079140.3-201ENST00000511111 550 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC116347.2-201ENST00000514912 523 ntBASIC6.26□□□□□ -1.41
ATF4P18848 RPS27AP18-201ENST00000515536 459 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 SOD1P3-201ENST00000518682 454 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC6.26□□□□□ -1.41
ATF4P18848 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AC006065.2-201ENST00000536978 211 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.26□□□□□ -1.41
ATF4P18848 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 NMNAT1P5-201ENST00000559657 841 ntBASIC6.26□□□□□ -1.41
ATF4P18848 ANP32BP1-201ENST00000564205 1297 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.26□□□□□ -1.41
ATF4P18848 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.26□□□□□ -1.41
ATF4P18848 AC239868.4-201ENST00000608318 671 ntBASIC6.26□□□□□ -1.41
ATF4P18848 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AC100793.4-201ENST00000613683 429 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL352984.2-202ENST00000613699 155 ntBASIC6.26□□□□□ -1.41
ATF4P18848 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AC099842.1-201ENST00000619919 596 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.26□□□□□ -1.41
ATF4P18848 RHOXF1P2-201ENST00000635431 502 ntBASIC6.26□□□□□ -1.41
ATF4P18848 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 SMG7-216ENST00000638826 219 ntTSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
ATF4P18848 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AC005332.9-201ENST00000620266 2921 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AL590065.1-201ENST00000603371 4774 ntBASIC6.26□□□□□ -1.41
ATF4P18848 TARS2P1-201ENST00000506124 2041 ntBASIC6.26□□□□□ -1.41
ATF4P18848 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 AC087203.2-201ENST00000526502 1587 ntBASIC6.26□□□□□ -1.41
ATF4P18848 AC019072.1-201ENST00000604535 1551 ntBASIC6.26□□□□□ -1.41
ATF4P18848 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ATF4P18848 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.26□□□□□ -1.41
ATF4P18848 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
ATF4P18848 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 AC119674.1-204ENST00000641348 1343 ntBASIC6.25□□□□□ -1.41
ATF4P18848 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.25□□□□□ -1.41
ATF4P18848 AL603750.1-201ENST00000624216 1717 ntBASIC6.25□□□□□ -1.41
ATF4P18848 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.25□□□□□ -1.41
ATF4P18848 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ATF4P18848 RN7SKP25-201ENST00000362449 308 ntBASIC6.25□□□□□ -1.41
ATF4P18848 RNU6-501P-201ENST00000364072 100 ntBASIC6.25□□□□□ -1.41
ATF4P18848 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC6.25□□□□□ -1.41
ATF4P18848 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.25□□□□□ -1.41
ATF4P18848 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.25□□□□□ -1.41
ATF4P18848 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms