Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 RNA5SP115-201ENST00000411160 107 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC023128.2-201ENST00000420880 1223 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 GPN3P1-201ENST00000423883 535 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 RPF2P1-201ENST00000424137 906 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC092646.1-201ENST00000427142 901 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 MTND2P4-201ENST00000445034 1004 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC104978.1-201ENST00000449387 391 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC234781.3-201ENST00000452540 973 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 RPL7L1P3-201ENST00000455249 689 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.46□□□□□ -1.38
COL6A2P12110 RPS26P24-201ENST00000497656 331 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 HPRT1P2-201ENST00000505250 544 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 IGKV1D-32-201ENST00000517449 318 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.46□□□□□ -1.38
COL6A2P12110 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC092865.1-201ENST00000544395 1023 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 NF1P12-201ENST00000549593 583 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC008015.1-201ENST00000555505 465 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 FAM30C-201ENST00000561158 410 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC091932.1-201ENST00000569381 427 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 AL583832.1-201ENST00000603227 784 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC024085.1-201ENST00000604299 432 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC023206.1-201ENST00000605824 298 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC067838.1-201ENST00000606064 577 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 AC061999.1-201ENST00000624454 177 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 AC092159.4-201ENST00000624944 550 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 CASC19-222ENST00000641321 1173 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.46□□□□□ -1.38
COL6A2P12110 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.46□□□□□ -1.38
COL6A2P12110 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL6A2P12110 ICE2P1-201ENST00000512800 1849 ntBASIC6.46□□□□□ -1.38
COL6A2P12110 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL6A2P12110 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AC083837.1-201ENST00000565297 2994 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC017007.4-201ENST00000503353 1352 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC011369.2-201ENST00000624423 1567 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL6A2P12110 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL6A2P12110 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 RN7SKP237-201ENST00000364663 301 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 LCN1P2-201ENST00000372030 223 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC074375.1-201ENST00000372993 192 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL6A2P12110 MIR431-201ENST00000385266 114 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 CHMP1B2P-201ENST00000399581 597 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 NACAP7-201ENST00000407371 609 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 MTND4P20-201ENST00000424125 869 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 GTF2IP2-201ENST00000424290 697 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 FDPSP6-201ENST00000425091 512 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 MUPP-201ENST00000438111 566 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AC239800.1-201ENST00000442049 719 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.45□□□□□ -1.38
COL6A2P12110 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.45□□□□□ -1.38
COL6A2P12110 AC023512.1-201ENST00000444513 499 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 MTCYBP42-201ENST00000444653 1130 ntBASIC6.45□□□□□ -1.38
COL6A2P12110 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.45□□□□□ -1.38
COL6A2P12110 EEF1B2P5-201ENST00000444820 548 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms