Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPL34P20-201ENST00000442771 351 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 AC109464.1-201ENST00000511091 819 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 SCARNA20.4-201ENST00000516969 131 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 OR4A43P-201ENST00000532938 908 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 WBP1LP8-201ENST00000617401 327 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.15□□□□□ -1.43
COL11A1P12107 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.15□□□□□ -1.43
COL11A1P12107 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.15□□□□□ -1.43
COL11A1P12107 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 AC005005.4-201ENST00000623789 16698 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
COL11A1P12107 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL11A1P12107 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
COL11A1P12107 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL11A1P12107 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL11A1P12107 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
COL11A1P12107 RNA5SP455-201ENST00000365190 119 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 MIR765-201ENST00000390226 114 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 TRY2P-201ENST00000448860 689 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.14□□□□□ -1.43
COL11A1P12107 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.14□□□□□ -1.43
COL11A1P12107 RNA5SP228-201ENST00000516232 133 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.14□□□□□ -1.43
COL11A1P12107 AC134349.2-201ENST00000535136 910 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.14□□□□□ -1.43
COL11A1P12107 AC100827.5-201ENST00000615883 426 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 AC015660.5-201ENST00000623238 564 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 AC091905.4-201ENST00000623432 202 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.14□□□□□ -1.43
COL11A1P12107 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 AC023421.1-201ENST00000590535 1785 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL11A1P12107 AC232271.1-201ENST00000602455 2715 ntBASIC6.14□□□□□ -1.43
COL11A1P12107 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 SNORA56-201ENST00000383966 129 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AL390879.1-201ENST00000439143 386 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 LINC02210-201ENST00000444561 288 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 SNORD125-201ENST00000459538 96 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC097484.1-201ENST00000471148 389 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.13□□□□□ -1.43
COL11A1P12107 AC109462.1-201ENST00000491087 368 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC093890.1-201ENST00000502554 540 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.13□□□□□ -1.43
COL11A1P12107 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.13□□□□□ -1.43
COL11A1P12107 AC122688.1-201ENST00000541494 223 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC005341.1-201ENST00000571086 708 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 MIR4480-201ENST00000582492 71 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
COL11A1P12107 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 AC144833.1-201ENST00000567953 4089 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.13□□□□□ -1.43
COL11A1P12107 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.13□□□□□ -1.43
COL11A1P12107 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 AL009179.1-201ENST00000406085 265 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.13□□□□□ -1.43
COL11A1P12107 AL139128.1-201ENST00000413921 941 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 RPS11P7-201ENST00000442125 465 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC104634.1-201ENST00000452720 462 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC083982.1-201ENST00000485679 344 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 AP002373.2-201ENST00000541631 1060 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.13□□□□□ -1.43
COL11A1P12107 AC108738.1-201ENST00000603703 237 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
COL11A1P12107 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.13□□□□□ -1.43
COL11A1P12107 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.13□□□□□ -1.43
COL11A1P12107 AC104964.3-201ENST00000606115 2860 ntBASIC6.13□□□□□ -1.43
COL11A1P12107 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL11A1P12107 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL11A1P12107 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL11A1P12107 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.12□□□□□ -1.43
COL11A1P12107 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.12□□□□□ -1.43
COL11A1P12107 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL11A1P12107 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms