Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RN7SKP113-201ENST00000363891 295 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 RPS26P38-201ENST00000414476 348 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TOP2AP11388 GYG1P1-201ENST00000460864 698 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AC008897.1-201ENST00000494006 347 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 MIR4737-201ENST00000583979 81 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AF230666.2-201ENST00000602328 725 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.36□□□□□ -0.91
TOP2AP11388 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
TOP2AP11388 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
TOP2AP11388 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
TOP2AP11388 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
TOP2AP11388 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC9.36□□□□□ -0.91
TOP2AP11388 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
TOP2AP11388 MIR192-201ENST00000384915 110 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 MIR1182-201ENST00000408363 97 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC9.36□□□□□ -0.91
TOP2AP11388 AC093414.1-201ENST00000434712 514 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC9.36□□□□□ -0.91
TOP2AP11388 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC9.36□□□□□ -0.91
TOP2AP11388 AC079168.1-201ENST00000458741 345 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC9.36□□□□□ -0.91
TOP2AP11388 MEMO1P5-201ENST00000604810 406 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AL133406.3-201ENST00000606817 541 ntBASIC9.36□□□□□ -0.91
TOP2AP11388 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.36□□□□□ -0.91
TOP2AP11388 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.36□□□□□ -0.91
TOP2AP11388 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TOP2AP11388 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC9.35□□□□□ -0.91
TOP2AP11388 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.35□□□□□ -0.91
TOP2AP11388 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.35□□□□□ -0.91
TOP2AP11388 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
TOP2AP11388 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.35□□□□□ -0.91
TOP2AP11388 AC245028.1-201ENST00000423259 256 ntBASIC9.35□□□□□ -0.91
TOP2AP11388 USP9YP9-201ENST00000429406 715 ntBASIC9.35□□□□□ -0.91
TOP2AP11388 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.35□□□□□ -0.91
TOP2AP11388 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC9.35□□□□□ -0.91
TOP2AP11388 AC009220.1-201ENST00000451614 275 ntBASIC9.35□□□□□ -0.91
TOP2AP11388 AL513533.1-201ENST00000453728 415 ntBASIC9.35□□□□□ -0.91
TOP2AP11388 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TOP2AP11388 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
TOP2AP11388 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC9.35□□□□□ -0.91
TOP2AP11388 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
TOP2AP11388 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOP2AP11388 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOP2AP11388 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.34□□□□□ -0.91
TOP2AP11388 AC026951.1-201ENST00000559530 2459 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOP2AP11388 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
TOP2AP11388 RAB28P1-201ENST00000411517 641 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.34□□□□□ -0.91
TOP2AP11388 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.34□□□□□ -0.91
TOP2AP11388 AL138878.2-201ENST00000440581 1241 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 AC073648.4-201ENST00000442655 781 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.34□□□□□ -0.91
TOP2AP11388 RN7SL738P-201ENST00000470264 297 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 ST13P12-201ENST00000508958 1094 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 AC091912.1-201ENST00000511351 248 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.34□□□□□ -0.91
TOP2AP11388 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC9.34□□□□□ -0.91
TOP2AP11388 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.34□□□□□ -0.91
TOP2AP11388 AC060780.2-201ENST00000589047 198 ntBASIC9.34□□□□□ -0.91
TOP2AP11388 GMFG-202ENST00000594700 397 ntTSL 2 BASIC9.34□□□□□ -0.91
TOP2AP11388 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
TOP2AP11388 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOP2AP11388 AC018765.1-201ENST00000623357 3446 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 AC100757.1-201ENST00000616872 1835 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOP2AP11388 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOP2AP11388 UGT2B24P-201ENST00000514441 1597 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOP2AP11388 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TOP2AP11388 AP004289.1-201ENST00000436307 2205 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 ATP5A1P1-201ENST00000454088 1321 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOP2AP11388 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TOP2AP11388 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TOP2AP11388 AC019050.1-201ENST00000418508 492 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.33□□□□□ -0.92
TOP2AP11388 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC9.33□□□□□ -0.92
TOP2AP11388 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC9.33□□□□□ -0.92
TOP2AP11388 LINC02210-201ENST00000444561 288 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 ARL6IP1P3-201ENST00000524544 560 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 OR4A43P-201ENST00000532938 908 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC9.33□□□□□ -0.92
TOP2AP11388 AC209154.1-201ENST00000582156 337 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 AC008745.1-201ENST00000604064 271 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC9.33□□□□□ -0.92
TOP2AP11388 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC9.33□□□□□ -0.92
TOP2AP11388 AC232271.1-201ENST00000602455 2715 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 LRRC37A16P-202ENST00000586022 3725 ntBASIC9.33□□□□□ -0.92
TOP2AP11388 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC9.33□□□□□ -0.92
TOP2AP11388 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC9.33□□□□□ -0.92
TOP2AP11388 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOP2AP11388 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms